KEGG   Dermatophagoides farinae (American house dust mite): 124496173
Entry
124496173         CDS       T08043                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dfr  Dermatophagoides farinae (American house dust mite)
Pathway
dfr03030  DNA replication
dfr03410  Base excision repair
dfr03420  Nucleotide excision repair
dfr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124496173
   03410 Base excision repair
    124496173
   03420 Nucleotide excision repair
    124496173
   03430 Mismatch repair
    124496173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfr03032]
    124496173
   03400 DNA repair and recombination proteins [BR:dfr03400]
    124496173
Enzymes [BR:dfr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124496173
    6.5.1.6  DNA ligase (ATP or NAD+)
     124496173
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124496173
DNA replication proteins [BR:dfr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124496173
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124496173
DNA repair and recombination proteins [BR:dfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124496173
   NER (nucleotide excision repair)
    Other NER factors
     124496173
   MMR (mismatch excision repair)
    Other MMR factors
     124496173
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Dbl7
Other DBs
NCBI-GeneID: 124496173
NCBI-ProteinID: XP_046915624
LinkDB
Position
Unknown
AA seq 725 aa
MFTHDSDDPMRKIFLRAFFNRQLILSSFIPIHRKLFCTSVKCFQKRRAKKLDRKMFLFKP
SNENKNSYDPSKSKYDMVNDACWKTNEKVPFIALAKTFSAIEDVSGRLKSIEIMSNYISS
VMALSHEDLVKSIYLCLNKVAPDYEGIELGIGTSLLMKALSEATGRNMAQLKKQLNDIGD
IGSCSEISKTNQRLLVQPKPLTVQHVFDTFKSIATMTGRNVMSNKVEKIKSLITCSQPIE
SRYIMRALSGKMRIGLGEKSLITAIAQAYMIYKNPDNRKQLDSERFKEKLNKNVSLLQTA
FNECPNYDKLIPALLENGFDDLSKSCYLIPGIPLKPMLAHPTKGVREVLQRLEGLEFTCE
YKYDGERAQIHLDNQGKIYIYSRNQENNTGKYPDIVKLMPDVMKSDVKSFIIDCEAVAYD
VVNKQILPFQVLSTRKRKNVEESDIKVHICLFAFDLIYFNDESLVKKSLYERRQLLQENF
EFIEGQFMRASSKDLNDIDVIQEFLDESIKNKCEGLMVKTLHKDASYEIAKRSFKWLKLK
KDYLEGTGDTLDLIPIGAYYGRGKRTGFYGGFLLACYDDKNDEFQSICKIGTGFSDEDLA
TLSTSLKDLSISKPKSYYNVDETLKADVWFEANQVWEIKCADLSISPVYKAAIGIIDPQK
GISLRFPRFIKVRDDKKPEDGTTAAQVAEMYLNQENQMNSANNEDDNNNDEQNESNSKSK
TDEFY
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgtttactcatgattcagatgatccaatgagaaaaatatttttacgcgctttttttaat
cgacaacttatattatcgtcattcattccaattcatcggaaattgttttgtacctcggtt
aaatgttttcagaaaaggcgtgccaaaaaattggatagaaaaatgtttctttttaaacca
tcgaatgaaaataaaaatagttatgatccatccaaatccaaatatgatatggtcaatgat
gcctgttggaaaacaaatgaaaaggtaccttttattgctttggctaaaacattctcagct
attgaagatgttagtggtcgtttgaaaagtatcgaaataatgagtaattatatatcatca
gtgatggctttatcacatgaagatttagttaaatcaatatatctttgtctgaataaagtt
gcgccagactatgaaggcattgaacttggtatcgggacatctttattgatgaaagcatta
tcggaagctactggccgtaatatggctcagctaaaaaaacagctcaatgacattggagac
attggctcttgttctgaaatttctaaaacgaatcaacgattactggtacaaccaaaacca
cttactgttcaacatgtattcgatactttcaaatcgattgctacaatgaccggtcgtaat
gttatgtcaaacaaagtggaaaaaattaaaagtttaattacctgttcacagccaattgaa
tcacgatatattatgcgtgcattgtccggaaaaatgagaattggactgggtgaaaaatca
ttaattacagctatagcacaagcatatatgatttataaaaatcccgataatagaaaacaa
cttgactcggaaagatttaaagaaaaacttaacaaaaatgtttcactattgcagacagcg
ttcaatgaatgtccgaattatgataaattaattccggccttattggaaaatggtttcgac
gatctttccaaatcatgttatctaatacctggaataccactaaagcccatgttagctcat
cctaccaaaggagttcgtgaagttttacaacgattagaaggattagaatttacatgtgaa
tataaatacgatggtgaacgagcacaaattcatctggataatcaaggtaaaatctacatc
tatagccgtaatcaagagaacaatactggaaaatatcctgatattgtaaaattgatgcca
gatgttatgaaaagcgatgtgaaaagtttcattatcgattgtgaagcagtagcctatgat
gttgttaacaaacaaattcttccatttcaagtgttgagcacaagaaaacgtaaaaatgtg
gaagaatccgatatcaaagttcatatatgtctttttgcattcgatctgatttattttaat
gatgaatctctggttaaaaaatcgttatatgaacgacgacaattacttcaggagaatttc
gaatttatagaaggtcaatttatgcgggcttcaagtaaagatctgaatgatattgatgtt
attcaagaatttttagatgaatccattaagaataaatgcgaaggattgatggtaaaaaca
ttgcataaagatgcaagctatgaaatagccaaacgttcatttaaatggcttaaacttaag
aaagattatttagaaggcactggtgatacgttggatttaataccgattggagcatattat
ggacgtggcaaaagaaccggcttttatggtggttttcttcttgcctgttatgatgataag
aatgatgaatttcaaagtatttgtaagattggcacaggattttccgatgaagatttggcc
actttatctacttcattaaaagatttaagcatatcaaagccaaaatcctattataatgtg
gatgaaacattaaaagctgatgtttggtttgaagcgaatcaagtttgggaaattaaatgt
gccgatttatctatttcgcccgtttataaagctgctatcggtattattgatcctcaaaaa
ggaatatcattacgttttccacggttcatcaaagttcgtgatgataaaaaacctgaagat
ggaacaacagccgctcaagttgctgaaatgtatttaaatcaggaaaatcaaatgaattcg
gccaacaatgaagatgataataataatgatgaacagaatgaaagtaattctaaatccaaa
acagatgaattctattaa

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