Deinococcus grandis: DEGR_29900
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Entry
DEGR_29900 CDS
T06640
Name
(GenBank) LPS biosynthesis protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dga
Deinococcus grandis
Pathway
dga00521
Streptomycin biosynthesis
dga00523
Polyketide sugar unit biosynthesis
dga00541
O-Antigen nucleotide sugar biosynthesis
dga01100
Metabolic pathways
dga01110
Biosynthesis of secondary metabolites
dga01250
Biosynthesis of nucleotide sugars
Module
dga_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DEGR_29900
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DEGR_29900
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DEGR_29900
Enzymes [BR:
dga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DEGR_29900
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Motif
Pfam:
dTDP_sugar_isom
Cupin_2
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
BBN96257
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Position
complement(3027809..3028357)
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AA seq
182 aa
AA seq
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MAEHTVRLAPEYAQALNFETYPAAPQIDGVWFHALKKNRSENGAFMEYVRLDEQGVQGVP
GQLTPRQISVSWAAPKRINAFHIHVKQEQNEIWCVLQGQLMIWLVDCREGSPTLGVKRKL
VFSGEQPMMVHIPSGVAHGYQAGEQGATLLYTMDAQFDITDPNEGRLPWNFFGDDLWAED
MG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacacaccgtccgtcttgcccctgagtacgcgcaggccctgaacttcgagacg
tatccggcggccccgcagattgacggggtgtggtttcacgccctgaagaagaaccgcagt
gagaacggcgcgttcatggagtacgtccgactggacgaacagggcgtgcagggcgtgccc
ggccagctgacgccccgccagatcagcgtatcgtgggcagccccgaaacgcatcaacgcc
ttccacatccacgtcaagcaggagcagaacgagatctggtgcgtgctacagggccagctg
atgatctggctcgtcgactgccgcgagggcagccccaccctgggcgtcaaacgcaaactg
gttttcagtggcgagcagcccatgatggtgcacatccccagtggtgtcgcccacggctac
caggccggtgagcagggtgcgacgctgctgtacaccatggacgcacagttcgacatcacg
gaccccaatgagggccgcctgccctggaacttcttcggtgatgacctgtgggccgaggac
atgggatga
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