Deinococcus gobiensis: DGo_PB0141
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Entry
DGo_PB0141 CDS
T01827
Symbol
recQ3
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dgo
Deinococcus gobiensis
Pathway
dgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DGo_PB0141 (recQ3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgo03019
]
DGo_PB0141 (recQ3)
03400 DNA repair and recombination proteins [BR:
dgo03400
]
DGo_PB0141 (recQ3)
Enzymes [BR:
dgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DGo_PB0141 (recQ3)
Messenger RNA biogenesis [BR:
dgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DGo_PB0141 (recQ3)
DNA repair and recombination proteins [BR:
dgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DGo_PB0141 (recQ3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFD27410
UniProt:
H8H1L3
LinkDB
All DBs
Position
P2:complement(107173..109515)
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AA seq
780 aa
AA seq
DB search
MTATVLPQALEVLQRVWGYNEFRGVQGDIVRTVAEGGHALVLMPTGGGKSLCYQLPSLLR
PGVGIVVSPLIALMKDQVDTLRQLGVRAAYLNSTLSPTAARTVEQAVLTGRLDLLYIAPE
RLLLPRTLELLHRAQIALFAVDEAHCVSQWGHDFRPEYQQLSVLTTEFPEVPRIALTATA
DDRTRADIRQVLGLQRAPEFVSSFDRPNIQYRVADKTSPRQQLLDFIQAEHLGDAGVIYC
LSRRSVEETAQWLQEQGLPVVAYHAGMPPQERSWAQERFLNEEGLIVVATVAFGMGIDKP
NVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLADVVNVRRMLADSDAPEDVKR
IEAGKLDALLTYCEAATCRRQLLLSYFGETLPEPCGNCDVCLNPPTVRDMTQEAQMALSA
AIRTGNRYGSAYLTDILLGKDNDKNKRHRQLPTYGVGQGHDVKVWRSVLRQLVSLGYLTA
GPYQGLTVTGRARGILRGEVRLLLREDTVKPRAPKRERAQATRVAIGAHDRPLFLALRAW
RAERAGQLKVPPYVIFSDATLKAVAELRPGSLHTLGTVSGIGERRLAEYGSEVLRIVRSG
VHEEQRRPRGTVQAHEFGLVPQDVTWETLAAPRVGSGGQDVRPASQEKAVLPELLEVTLE
SPDPPLPLPVEPVAPEVEVVRVPEVIAPLVAQVEPSVPVEASGPQPHPVVLVALQELRRE
LARETGYAAYVVFPNATLTALATRLPRTMAELIGLPGLGAKRIEAYGESILDAINTELDE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaccgtgctgccccaggcgttggaagtcctgcaacgggtctgggggtacaac
gaatttcggggcgtgcagggtgacatcgtgcgcacggtcgccgagggggggcacgcgctc
gtgctcatgccgaccggcgggggcaagagcctgtgttaccagctccccagcctcctgcgc
cctggggtgggcatcgtcgtttccccgctgatcgcgctgatgaaggaccaggtggatacc
ctgcgccagctgggcgtgcgggcggcctacttaaactcgaccctctcccccacggcggcc
cggacggtcgagcaggccgtcctgacagggcggctggatctgctctacatcgccccggag
cggctcctcctgccccgcacgctggagctgctgcaccgggcgcagattgccctgtttgcg
gtcgacgaggcgcactgtgtctcccagtgggggcatgacttccggccggagtaccagcag
ctcagcgtcctgaccaccgagtttcccgaggtgccccggattgccctgacggcgacggcc
gatgaccggacccgggcggacatccgacaggtgctgggcctgcagcgggcgccggagttc
gtctccagcttcgaccggccgaacatccagtaccgggtggcggacaagaccagtccccgg
cagcaactcctggactttatccaggcggagcacctgggcgatgctggggtgatctactgc
ctgtcccggcggtcggtggaggaaacagcgcagtggcttcaggagcagggcctgccggtg
gtggcgtaccatgcggggatgccgccgcaggagcgcagctgggcgcaggagcgcttcctg
aacgaggaagggctgatcgtggtcgccacggtggccttcggcatgggcatcgacaagccg
aacgtgcgcttcgtggcgcacctcgacctgcccaagagcatggagggctactaccaggag
acgggtcgcgccggacgcgacggcctgccgagtaccgcgtggatggtctacgggctggcc
gacgtggtgaacgtacgccggatgctcgcagatagtgacgcacctgaggacgtgaaacgc
atcgaggcagggaagctcgacgccctgctgacctattgcgaggccgcgacatgccggcgg
cagttgttgctttcctacttcggcgagacgcttccagagccgtgcgggaactgcgacgtg
tgcctgaacccgcccacggtgcgggacatgacgcaggaggcacagatggcgctctcggcg
gcgattcggacggggaaccgatacgggtcggcgtacttgacggacatcctgctggggaag
gacaacgacaagaacaagcggcaccggcagctcccgacctatggggtgggtcaggggcat
gacgtgaaggtctggcgcagtgtgctgcggcagctggtgagcctgggatacctgacggcc
gggccgtatcagggcctgacggtgaccgggcgggcgcggggcatcctgcgcggggaggtg
cggctgctcttgcgcgaggacaccgtgaagcctcgggcacccaagcgggagcgcgcgcag
gcgacgcgggtggcgatcggcgcacatgaccggccactgttcctggccttgcgggcatgg
cgggcagagcgcgccgggcaactgaaggtaccgccgtacgtgatcttcagcgacgcgacc
ttgaaggccgtcgcggagttgcggccgggcagcctgcacacgctgggcacagtcagcggg
atcggggagcgccggctggcggaatacgggtcagaggtgctgcggatcgtgcgctctggg
gtccacgaggagcaacggcggccgcgcgggaccgtacaggcacacgagttcggcttggtg
ccccaggacgtgacctgggagacgctggccgcgccccgggttggatcagggggacaggac
gtgcggccagcatcccaagagaaggcggtgctgcccgagctgctggaggtgacgctggaa
tccccagacccgcccctcccgctgcccgtcgaacctgtggctcccgaagtcgaggtcgtg
cgagtaccggaggtgattgcccccctggtggcgcaggtggagccgagtgtccccgtcgag
gcctcagggcctcagccgcacccggtggttctggtggccttgcaagagctgcggcgcgaa
ttggcccgcgaaacgggatatgccgcgtatgtggttttcccaaacgccacattgacagcg
ttggccactcgcctgccacggacgatggctgaactgatcggcttacccggtttaggggcg
aagcggattgaggcctatggagaaagcattttggacgcgatcaataccgagttggacgag
tag
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integrated database retrieval system
