Drosophila grimshawi: 6564880
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Entry
6564880 CDS
T01061
Name
(RefSeq) regulator of nonsense transcripts 1 homolog isoform X2
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03013
Nucleocytoplasmic transport
dgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6564880
03015 mRNA surveillance pathway
6564880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgr03019
]
6564880
Enzymes [BR:
dgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
6564880
5.6.2.5 RNA 5'-3' helicase
6564880
Messenger RNA biogenesis [BR:
dgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
6564880
mRNA cycle factors
Common to processing body (P body) and stress granule
6564880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6564880
NCBI-ProteinID:
XP_001991595
FlyBase:
FBgn0119455
UniProt:
B4JKW7
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MSVDTYAPSSALTFLDMDDNELLRGADTQPTPYDYRDFTMPSTSQSQTQGDQLPELQPRR
VSIHSNDQLIQPRLGSITNVLAELQFEEEDDESIGGGGGGVGGGNGIGRCVGGTSAYVKE
LPAHACKYCGIHDPATVVMCNNCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLG
ETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRC
FLAWLVKQPSEQGQLRARQISAAQINKLEELWKDNIEATFQDLEKPGIDSEPSQVLLRYE
DGYQYEKTFGPLVSLEADYDKKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLM
HGDELRLRYVGELYNPWSEIGHVIKVPDNFGDDVGLELKCFSNAPLKFTSNFSVDFIWKC
TSFDRMTRALRNFAMDRNSVSNYIYSRLLGHGRADGSDEVLFRGPQPKLYSAPHLPDLNR
SQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEK
IHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEK
RYRSLKRATENQLLEAADVICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLG
AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPS
NFFYEGSLQNGVCAEDRRLKLDFPWPQPDRPMFFLVTQGQEEIAGSGTSFLNRTEAANVE
KITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREK
DIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKD
RKVLVEGSLNNLKESLIHFQKPKKLVNSMNIGAHFMSTMMADAKEVLVPGSIYERSSGYT
RQAPLNPPTQSFNGVGGAGVGIGGHYAPNPYANYATAGTGVGVATAAAMATVGNNMINPV
YGSGAGGAGGNNSYGPIGGVGNNTAGNPASWTAANLHDSIGFISNDHGAAALGNMPVPVG
MFMNMSSLPPRFYNQHQQAIMAAKQNRAMQNNQSSGYVPAISAGPAGNSKKGNKMSKTRA
GGGNNLNAGMLQGTEPAAAGAASEPATTTLQITAGAAATTGAGATSGVSGTSITTATPTA
AAGSGGASGSGIGAPFSQYPAALSLQMTQPSGFALSQQPELSQDFGHISQMDGLLSQDDV
FNVSGERSLNQFSQPY
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggacacgtatgcgccaagttcggcgctcacattcctggacatggatgacaat
gagttgttgcgcggcgccgatacacaaccgacgccatatgattatcgtgacttcaccatg
ccatccacatcgcagagccagacccagggtgaccagctgcccgaactgcagccaagacgc
gttagcattcacagcaatgatcagttgatccagccacgtttgggttcgattaccaatgtt
ttggccgaattacaattcgaggaggaagatgatgagagcatcggcggcggcggtggtggc
gtcggcggcggcaacggcatcggtcgctgtgtcggcggcacctcggcctatgttaaagag
ttgccggcacatgcgtgcaaatattgtggcatccatgatccggccaccgttgtcatgtgc
aacaattgcaagaaatggttttgcaatggacgcggcagcacctccggctcgcacatcatc
aatcatctagtgcgtgccaagcatcgcgaggtgaccctccacggcgatggcccacttggc
gagaccatactcgagtgctattcgtgtggtgtgcgcaatgtgttcgtattgggctttata
cccgccaaggcggattctgtagtggtgctgctgtgccgccagccatgcgccgcccagaac
tcactgaaggacatgaactgggatcaggagcagtggaaaccgctaattgccgatcgctgc
tttctcgcctggctggtcaaacagcccagcgagcagggtcagttgcgtgcacgccaaatt
tccgcagcgcaaatcaataagctcgaggaactgtggaaggataacattgaggcaacattc
caggatttggaaaagcccggcatcgattcggagccgtcgcaagtgctgttacgctacgag
gatggctatcaatatgagaagacctttggcccactggtcagcctcgaggccgactacgat
aagaagctgaaggagtccgccacacaggagaacatagaggtgcgctgggatgtgggcctc
aataagaagacaattgcgtattttacgcttgccaaaaccgattcagacatgaaactcatg
cacggcgatgagctccgactgcgctacgtcggcgaactgtacaatccgtggagcgaaatt
gggcatgtcatcaaggtgcccgataactttggcgacgatgttggcctggagctcaaatgc
ttctcaaatgccccgctcaagttcaccagcaactttagcgtggacttcatatggaagtgt
acatcatttgatcggatgactcgtgctctccgcaactttgccatggatcgcaattcggtg
tccaactatatctactcgcgtctgctgggacacggtcgggccgatggcagcgatgaggtg
ctgtttcgtggcccacagcccaagctgtatagtgccccccatttgccggatctgaatcgg
tcgcaggtgtatgcggtgaagcatgcactgcagcgacctcttagcctgatccagggaccg
cctggcactggtaaaaccgtcacatcggctacaattgtgtatcagctggtgaagcagcat
ggcggcacggtgctcgtctgtgcgcccagcaatacggctgtcgatcagctcaccgagaag
attcatcgcaccaatctgaaggtggtgcgcgtttgtgccaagagtcgcgaggccatcgat
agtcccgttagcttcctggcgctgcacaatcagatacgcaacatggaaacaaattcggag
ctaaagaagctgcaacaactgaaggatgaaaccggcgagctaagctcagcggacgagaaa
cgctatcgcagtctgaaacgtgccaccgaaaatcaactgctcgaggcagccgatgtcatc
tgttgcacatgcgttggcgccggcgatgtccgtttgtctcgcatcaaattcacatcgata
ctgatcgatgagtccatgcagtccacggagcctgagtgtatggtgccggtggtgcttggg
gccaagcaactcattctcgtcggtgatcactgccagctgggaccagtggtcatgtgcaag
aaagccgcgcgcgccggcctctcccagagcctgttcgagcgtctcgttgtgctgggcata
cgaccgttccgtctggaggtgcaatatcgcatgcatccggagctgtcacaatttccgtcc
aactttttctatgagggctcgctgcagaatggtgtctgtgccgaggatcgccgccttaaa
ctggactttccgtggccgcagccagatcgtccgatgttctttttggttacgcagggacag
gaggagattgccggctcgggcacatcgtttctcaatcgaaccgaggcggccaatgtggag
aaaatcacaacacgtttcctcaaggcgggcatcaaaccggaacagattggcataattacc
ccgtatgagggtcagcgtgcctatctggtccaatatatgcagtaccagggcagcttgcac
tcgcgcctgtatcaggagatcgagatagccagcgtggacgcgtttcagggtcgcgagaag
gacatcattattatgtcgtgtgtgcgctccaatgagcgacagggcatcggtttcctcaac
gatccgcgtcgcttgaatgtggcgctaactcgcgccaaatacggcatcatcattgtcggc
aatccgaaggtattgtccaagcaacagctgtggaatcatttgctcaacttctacaaggat
cgcaaagtgctcgtcgagggctcactaaataatctaaaggagtccctcatccatttccag
aagcccaagaagcttgtgaacagtatgaacattggcgcccattttatgtccacaatgatg
gccgatgccaaggaggtgctcgtccccggttccatatacgagcgtagcagcggctataca
cgccaggcgccactcaatccacccacacaatccttcaatggtgtcggtggcgctggcgtt
ggcattggtggccactatgcacccaatccctatgccaactatgcgactgctggtactggt
gttggtgttgcaactgcagctgctatggccaccgttggcaataatatgattaatcccgtt
tatggctccggcgctggcggtgctggtggcaacaatagttatggacccattggcggggtc
ggcaacaacactgcaggaaatccagccagctggacagcagcgaatctgcatgattcgatt
gggttcatctcgaatgatcatggcgccgctgccttgggcaacatgcccgtcccagtgggc
atgttcatgaacatgagcagtctgccgccccgcttctacaatcagcatcagcaggccatt
atggccgccaagcagaatcgggcaatgcagaataatcagtcgtctggctatgtgccggcc
atttccgccggtccagccggcaacagcaagaagggcaacaagatgtcaaagacacgtgct
ggcggcggcaacaatttgaatgctggcatgctgcaaggaacggaaccagcagctgcagga
gcagcatctgaaccagcgacaacaacgcttcaaataacagcaggagcagcagcaacaaca
ggagcgggagcaacatctggagtatctggaacatcaatcacaacagcaacaccaacagca
gcagcaggaagtggtggagcaagtggatcaggcattggagctccattcagtcaatatcca
gcggctctgtcgctgcagatgacacagccgagcggctttgcgctgtcccagcagccggag
ctgtcgcaggactttggtcatatctcccaaatggacggactgctctcacaggatgatgtt
ttcaatgtgtcgggcgaacgcagtttgaatcaattctcgcaaccttactga
DBGET
integrated database retrieval system
