Dendronephthya gigantea (soft corals): 114520489
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Entry
114520489 CDS
T06112
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03022
Basal transcription factors
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114520489
09124 Replication and repair
03420 Nucleotide excision repair
114520489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114520489
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114520489
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114520489
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114520489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
DZR
VWA_3
Motif
Other DBs
NCBI-GeneID:
114520489
NCBI-ProteinID:
XP_028396572
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MAGDDDDDGGYRWLNQYEKTWEVIQEDAQGGLQFVDDDFIQRAKRRRLLAQPGNTRLGMM
RHLFIILDLSKAMGVADLKPSRLLCSLKLLQNFTVEYFDQNPISQLGIITTNNKRAEKLS
ELTGNPRIHTSALSQKEKPNICEGEPSLQNALETAKRSLTHLPSHASREILIVFGSLTTC
DPSDILETFESLKECKIRCSVIGLSAEVRVLKTLATMTQGVYDVILDEKHYRDILMQHVI
PPSAKADAEAALIRMGFPQHLISSTPSLCLCHSEGEWNKEINSSGYFCPQCNSKYCELPV
QCKACGLTLVSAPHLARSFQHLFPLAQFAEITSDEVSNKKYCHSCESLLSKNLIYKCPEC
DERFCFECDLFIHETLHVCPGCSSKHTVNNTV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgatgatgatgacggcggatatagatggttgaatcagtatgaaaaaact
tgggaggttattcaggaagatgcacaaggaggcttgcagtttgttgacgatgactttata
caacgtgctaagagaaggagacttttggcacaacccgggaatactcgtctcggcatgatg
cgtcatttgtttattatccttgatttatcaaaggcaatgggagtggcggaccttaaacca
tcccgactgttgtgctctttgaagctccttcaaaactttacagtcgaatattttgaccaa
aatccaatttctcagctaggtatcatcacaacaaacaacaaaagagctgaaaaattaagt
gagctgactggcaacccacgaattcatacatcggctctttctcagaaagaaaaaccaaac
atatgtgaaggtgaaccttccttacaaaatgccctggaaacagcaaagagatctttaact
catcttccaagtcatgcaagtcgtgaaattttgattgtttttggaagtttaacaacctgt
gatccaagtgatatcttggaaacttttgagtccctgaaggagtgtaagatccgatgttca
gttattggtctgtctgctgaagtcagagttctcaaaacacttgctactatgactcagggt
gtctatgatgtaattttggatgagaaacattatagagatattcttatgcaacatgttata
ccaccaagtgcaaaggctgatgcagaagcagcactcatacgtatgggcttcccacagcat
ctaataagttcaacaccatcattatgtttgtgtcattcagaaggagaatggaacaaagaa
ataaacagctctggttacttttgtccacaatgcaacagcaagtattgtgaattgcctgtc
caatgtaaagcttgtggtctaacacttgtgtctgctccacatcttgcacggtcatttcaa
catttgtttccacttgcacaattcgctgaaattacctcagatgaagtgtcaaataaaaaa
tattgccatagttgtgagtcactactcagtaaaaatttaatctacaaatgtccagaatgt
gatgaaagattttgtttcgaatgtgatctttttattcatgaaacattacatgtatgtcct
ggatgctctagcaaacatactgttaataacactgtataa
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