Dendronephthya gigantea (soft corals): 114522865
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Entry
114522865 CDS
T06112
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03013
Nucleocytoplasmic transport
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114522865
09122 Translation
03013 Nucleocytoplasmic transport
114522865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114522865
03041 Spliceosome [BR:
dgt03041
]
114522865
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114522865
Spliceosome [BR:
dgt03041
]
Complex C
Other components
EJC/TREX
114522865
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114522865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
114522865
NCBI-ProteinID:
XP_028399436
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MADENDISNFDAQKVCIGFKELIKDIKDGNISALSAHFASTVGSEAEKRSSADQAFREIL
MEKLTVDKDSTVCDGLVHNAIQCSRKGITSVPLPITLLSDMFDCITLDVCEQLFHIVEKH
VVTWTSEPFFLAGKNLLLRMCNDLLRRLSTSQNTVFCGRIQLILTRLFPLSEKSGLNLMS
QFNLENVTAFDYKGTPSKDKSSSKKEVNDSEVVDYVLYTKFWSLQDFFRSPTQCYHELNW
KKFVDNASAVLAAFSSHKLEHVSKKRKHNESKDVAMSDASDQQTYFAKFLTSEKLLNLQL
NDSNFRRTILVQLLILFQYLTGEVKFKSASQKLKEKQSSFVKDTTSKVYELLRETPPDGD
KFAKYVEGALNREENWISWKNASCPSFVKEKEEATTDSTKIPRKRKAKERIANITSGSKI
DMGSNELTRLWNLCPDNMAACRSEKRNVLPDLKEFFEEAIDQADPESQIEEQYKLVNDPK
FGWRALRLLSRRSQHFFQSSTNPFKTLPQYLDLAIQQLGQELMPPIKIEESTIVENGTST
EDKIQDTKPTPQVVIKQEKVED
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaaatgatatttcaaattttgatgctcaaaaagtttgtatcggtttcaag
gagctaatcaaagatataaaagatggaaatatttccgcattgtccgctcattttgccagc
acagtcggcagtgaagcagagaaacgctcatccgctgaccaggcatttcgagaaattctc
atggaaaagctgactgttgacaaagattcaactgtatgtgatggtttggtccacaatgca
attcagtgttcaaggaaaggcatcacctctgtacctctcccaataactttgttgtcagac
atgtttgactgtataacacttgatgtttgtgagcaattgtttcatattgttgagaaacat
gttgtaacctggacatctgaaccatttttcctagcagggaagaacctgcttctcaggatg
tgtaatgatttattacgtcgcttatcaacatcccagaatactgtattctgtgggagaata
cagttgattcttacaagactttttccactctcagaaaaatcaggtttaaacctgatgagt
caattcaatttggaaaatgtgacggcatttgattacaagggaactccaagtaaggacaaa
agtagttcaaaaaaggaagttaatgacagtgaggtagttgattacgtgctctacacgaaa
ttttggtcgttgcaagatttctttcgaagtcccacgcagtgttatcatgaactaaactgg
aagaaatttgttgataatgcgtctgcagttcttgcagcgttcagcagtcataaactggag
cacgtttcgaagaaacggaaacacaacgagagcaaagatgttgcgatgagcgacgcttca
gatcagcagacgtatttcgccaagtttctgacgagcgagaagttactaaatttgcagtta
aatgattcaaactttcgccgaacaattctggttcaactactgatattatttcaatatctc
actggagaggtaaagtttaaaagtgctagtcaaaaattgaaagagaagcaaagttcgttc
gtgaaagatacaacttcaaaagtgtacgagttgctcagagaaacaccgcctgatggggat
aagttcgcgaaatatgtcgagggtgcattgaacagagaagagaattggatatcatggaag
aacgccagctgtccaagttttgtgaaagaaaaggaggaagcgacgacggactccaccaag
ataccacgaaaacgtaaggcaaaagagcgaatcgccaacatcacctcaggatctaagata
gacatgggaagcaatgaactaacgcgtctttggaatctctgccctgacaacatggcggcc
tgcaggtcggaaaaaagaaacgttcttcccgacttgaaagaatttttcgaggaagcaatc
gatcaagctgatcccgaaagccagatcgaagaacagtacaaacttgttaatgatccgaaa
tttggttggagagctctgcgactactgtcgaggagaagtcaacatttctttcaatccagc
acgaatcccttcaaaacgttaccgcaatatttagacttagccatacaacagctggggcaa
gaacttatgcctcctattaaaatagaagaatcgacgattgttgaaaatggtacttccacg
gaagacaagatacaagacacgaaaccaacaccgcaggtcgttatcaaacaggagaaggtg
gaagactaa
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