KEGG   Dendronephthya gigantea (soft corals): 114522865
Entry
114522865         CDS       T06112                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03013  Nucleocytoplasmic transport
dgt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114522865
  09122 Translation
   03013 Nucleocytoplasmic transport
    114522865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114522865
   03041 Spliceosome [BR:dgt03041]
    114522865
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114522865
Spliceosome [BR:dgt03041]
 Complex C
  Other components
   EJC/TREX
    114522865
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114522865
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 114522865
NCBI-ProteinID: XP_028399436
LinkDB
Position
Unknown
AA seq 562 aa
MADENDISNFDAQKVCIGFKELIKDIKDGNISALSAHFASTVGSEAEKRSSADQAFREIL
MEKLTVDKDSTVCDGLVHNAIQCSRKGITSVPLPITLLSDMFDCITLDVCEQLFHIVEKH
VVTWTSEPFFLAGKNLLLRMCNDLLRRLSTSQNTVFCGRIQLILTRLFPLSEKSGLNLMS
QFNLENVTAFDYKGTPSKDKSSSKKEVNDSEVVDYVLYTKFWSLQDFFRSPTQCYHELNW
KKFVDNASAVLAAFSSHKLEHVSKKRKHNESKDVAMSDASDQQTYFAKFLTSEKLLNLQL
NDSNFRRTILVQLLILFQYLTGEVKFKSASQKLKEKQSSFVKDTTSKVYELLRETPPDGD
KFAKYVEGALNREENWISWKNASCPSFVKEKEEATTDSTKIPRKRKAKERIANITSGSKI
DMGSNELTRLWNLCPDNMAACRSEKRNVLPDLKEFFEEAIDQADPESQIEEQYKLVNDPK
FGWRALRLLSRRSQHFFQSSTNPFKTLPQYLDLAIQQLGQELMPPIKIEESTIVENGTST
EDKIQDTKPTPQVVIKQEKVED
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggccgacgaaaatgatatttcaaattttgatgctcaaaaagtttgtatcggtttcaag
gagctaatcaaagatataaaagatggaaatatttccgcattgtccgctcattttgccagc
acagtcggcagtgaagcagagaaacgctcatccgctgaccaggcatttcgagaaattctc
atggaaaagctgactgttgacaaagattcaactgtatgtgatggtttggtccacaatgca
attcagtgttcaaggaaaggcatcacctctgtacctctcccaataactttgttgtcagac
atgtttgactgtataacacttgatgtttgtgagcaattgtttcatattgttgagaaacat
gttgtaacctggacatctgaaccatttttcctagcagggaagaacctgcttctcaggatg
tgtaatgatttattacgtcgcttatcaacatcccagaatactgtattctgtgggagaata
cagttgattcttacaagactttttccactctcagaaaaatcaggtttaaacctgatgagt
caattcaatttggaaaatgtgacggcatttgattacaagggaactccaagtaaggacaaa
agtagttcaaaaaaggaagttaatgacagtgaggtagttgattacgtgctctacacgaaa
ttttggtcgttgcaagatttctttcgaagtcccacgcagtgttatcatgaactaaactgg
aagaaatttgttgataatgcgtctgcagttcttgcagcgttcagcagtcataaactggag
cacgtttcgaagaaacggaaacacaacgagagcaaagatgttgcgatgagcgacgcttca
gatcagcagacgtatttcgccaagtttctgacgagcgagaagttactaaatttgcagtta
aatgattcaaactttcgccgaacaattctggttcaactactgatattatttcaatatctc
actggagaggtaaagtttaaaagtgctagtcaaaaattgaaagagaagcaaagttcgttc
gtgaaagatacaacttcaaaagtgtacgagttgctcagagaaacaccgcctgatggggat
aagttcgcgaaatatgtcgagggtgcattgaacagagaagagaattggatatcatggaag
aacgccagctgtccaagttttgtgaaagaaaaggaggaagcgacgacggactccaccaag
ataccacgaaaacgtaaggcaaaagagcgaatcgccaacatcacctcaggatctaagata
gacatgggaagcaatgaactaacgcgtctttggaatctctgccctgacaacatggcggcc
tgcaggtcggaaaaaagaaacgttcttcccgacttgaaagaatttttcgaggaagcaatc
gatcaagctgatcccgaaagccagatcgaagaacagtacaaacttgttaatgatccgaaa
tttggttggagagctctgcgactactgtcgaggagaagtcaacatttctttcaatccagc
acgaatcccttcaaaacgttaccgcaatatttagacttagccatacaacagctggggcaa
gaacttatgcctcctattaaaatagaagaatcgacgattgttgaaaatggtacttccacg
gaagacaagatacaagacacgaaaccaacaccgcaggtcgttatcaaacaggagaaggtg
gaagactaa

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