Dendronephthya gigantea (soft corals): 114523871
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Entry
114523871 CDS
T06112
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgt03016
]
114523871
Enzymes [BR:
dgt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
114523871
Transfer RNA biogenesis [BR:
dgt03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114523871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
ArsD
Hydrolase
Motif
Other DBs
NCBI-GeneID:
114523871
NCBI-ProteinID:
XP_028400729
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MADQSSRLDSAACGKLRIFVCKFCIFALIFGQSVSGSEIDNEPYLGSDDSWSVFLTKWWQ
TLTVTLISAIIACCSVVWTLKIAACPSENEEGLNDIKNARPEIRINSVKIFFATQTGTSQ
YFAKRLQSAINQQLQVTSKVINLNDYDPDDSLTTEINPGTLCVFILATYTDGEPTNDASW
FYKWLRETAFDFRVQKSMLLGLNYCVLGLGNSLYEEHFNSVGINVDQWLHDLSANRVLPM
GISDENVAESKNGGKEEDFNAWMKVLMMYLKARSTGENKSCCEDENACECQNDMQVKSEL
YESSSEGEHVDEDDYSNSGDVMDVEDLGTVVSKMNVAKKNKIIQEPKEMITPLLRKALTK
QGYKLVGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMESTPSLACANKCVFCWRH
HTNPVGTEWRWKMDEPDHIVNEAIKNHRNMIKQFKGVPGVKQERLEEGMAVRHCALSLVG
EPIMYPKINDLVRLLHDRGISTFLVTNAQFPDAIKNLLPVTQLYVSVDASTKESLKKIDR
PLFRDFWPRFLQSLEALENKGQRTVYRLTLVKGWNVEEIKAYSKLVDLGKPDFIEVKGVT
YCGDSKASSLTMKNVPWHEEVISFVEQLTDALPGYEIASEHEHSNCLLIANTKFKVNGIW
HTWIDYPKFHSLMKKYNESNGEATFTSLDYMEETPSWAVFGNTHRGFDPNETRWMRKGKT
KDLSGC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagagttcacgtctggattcagctgcttgtggaaagttgcgtattttcgtt
tgcaaattctgcatctttgcattgatttttgggcaatcggtctcgggaagtgaaattgac
aacgagccatacttgggatcggatgattcctggtctgttttcttgacgaaatggtggcag
actttgacggtcacgttgatttcagccattattgcttgctgtagtgttgtgtggacctta
aaaatagctgcatgcccatcagaaaacgaggaaggtttaaatgatatcaagaatgcccgt
cctgagataagaataaattctgtgaaaattttctttgcaacacagactggaacatctcag
tatttcgctaaaagattgcaatcagcaataaatcaacagttgcaagtgacttcaaaagtt
atcaacttgaatgattatgatccagatgattcattaacaacagagatcaaccctggaact
ttgtgtgttttcattttggccacatacactgatggggaaccaacaaatgatgcaagttgg
ttctacaaatggcttagggagactgcatttgattttcgagttcaaaaatctatgttactt
ggtttaaattattgtgtgttgggtcttggcaattctctttatgaagaacattttaattct
gttggtatcaatgttgatcaatggttacatgatctgagtgccaacagagtcctgccaatg
ggtatttctgatgaaaatgttgcagaaagtaaaaatggtggcaaagaagaagattttaat
gcttggatgaaggttttaatgatgtatctcaaagcaaggtcaactggtgagaacaagtct
tgttgtgaagatgaaaatgcttgtgaatgccagaatgatatgcaagtcaaaagtgaactt
tacgaaagcagcagtgagggggaacatgttgatgaggatgactattccaacagtggtgat
gtcatggatgttgaggatctgggaacagttgttagtaaaatgaatgtggcaaagaagaac
aagattattcaagaaccaaaagaaatgattactccactactaagaaaagccttaactaaa
caaggatacaagcttgtgggttcccactctggagtgaagctgtgtcgttggacaaagtca
atgttgcgtggcagaggcgggtgttataaacatacattttatggtattgaaagtcatcgt
tgtatggagagcactccaagtttagcatgtgctaataaatgtgtcttttgttggaggcat
catacaaatccagttggtacggagtggagatggaagatggatgagccagatcatattgtc
aatgaggcaataaaaaaccatcgaaatatgataaaacagttcaaaggtgttcctggggtc
aagcaagaacgtcttgaagaaggaatggctgtgagacactgcgccttgtctttagttggt
gagcctattatgtatccgaaaataaatgatctcgtcaggctgcttcatgatcgtggtatc
tcaacattccttgtgaccaatgcacagtttccagatgctatcaagaatctcttgccagtc
actcagttgtatgtcagcgtggatgccagtactaaagaaagtttaaagaaaattgatcga
ccactcttcagagatttctggccaagatttttacaaagtcttgaagccttggagaacaag
ggtcaaagaacagtgtatcgtttgacattggtgaaaggttggaacgtagaggagataaag
gcttattctaagcttgtggatctggggaaaccagattttattgaagtgaagggtgttacc
tactgtggagattccaaagcatcttcgctcacaatgaagaatgttccatggcacgaggag
gttataagctttgtagaacaactcacagatgcccttccaggttatgaaatagcatccgaa
catgaacattctaattgccttctaattgccaatacaaagttcaaagttaatggcatctgg
catacatggattgactatcctaaatttcactctttgatgaaaaagtataacgaatcgaat
ggtgaagccacattcacgtcattggattacatggaagagactccttcatgggcagttttt
ggaaacacacatcgaggttttgatccaaatgagacaagatggatgcgtaaagggaagact
aaggatctttcaggatgctag
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