Debaryomyces hansenii: DEHA2G04224g
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Entry
DEHA2G04224g CDS
T01026
Name
(RefSeq) DEHA2G04224p
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dha
Debaryomyces hansenii
Pathway
dha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DEHA2G04224g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2G04224g
Enzymes [BR:
dha01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DEHA2G04224g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
DEHA2G04224g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
mRNA_cap_enzyme
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
2904603
NCBI-ProteinID:
XP_461730
UniProt:
Q6BJ91
LinkDB
All DBs
Position
G:complement(361379..364204)
Genome browser
AA seq
941 aa
AA seq
DB search
MSYLDDIERPKNELNDASFNFLVEQLFSKLDVVSSEHLGPFPNVTSKKNFIIESFIQQWK
QFIGNDIFPAARLIFPNRDKRLYFIKDVVLARLVIKMFNIPKNSIDYDKLFNYKKHYHDY
MHLNRYANKHLRSLPLIISQIISERRDPSKIVKSTFTINQINEILDELCSPEATKSEIQI
GILKPVIEKLTIEEIRWFTTMILKKSILASFEVIFFRAWHPDAPRLFNICNNLSKVFWLL
TDPEKRLDPDQLNVQLMYPFLPQLSQKLSISYDQLCNKMNNEFFIEEKMDGDRMIMHMEN
NKFKFFSRRTKDYTLLYGSNLQIGSLTKHLRDAFDPKVKSIILDGEMVAWDYKRNLILPF
GTLKASAVQEAVRQFTTTDVFEQQSSWPLFIIFDILHLNGKDLTRYPLFYRKDLLHKVIN
PIPHKFEILQFIKCKDANDIKLAIRNIISERSEGIMVKNTKSNYHVASRNNCWIKIKPEY
LEQFGENLDLVVIGIIPGIKNSYICGLRDSDDNDIFKSFCTVANGFSENEFNKIERLTTG
KWVEYKKRPPPDDLLKFGTKKPTSWIHPNESVVLEIKARSIDCTYLSTYAVGTTLHNLYC
RGIREDKSYDECITLNEYKEIKLKYSSEFNKSQSIVKNRKRFINSFEEKLTNDKRRQIEV
ISKLFGNFKFLILSDKLNLTDNERISILEIGKTIKRYGGAIIHNPLNQSGDKQIVTLSEK
LTTKCEIYLKKGFDIIMPEWVFECIRRNSIVPLEPSFILDSINPTIVENARNQVDGFGDS
YVINVREPVFTFVQRLKIPHSLSKEKFHEYTDDFINELNRQDISLPIGFLFYNINFYLVD
ATTVCEWQSKILERKIERFQGKISSHLPECSFIIVSNASNQDSSLRDDLLSRVNSLSKEI
SQSVDFGTQGMSKIPRVVNETFIDQCIKYNVLVDPQDHLFV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcttgatgatattgagagacctaagaatgagcttaatgatgcttcattcaat
ttcttagtggaacagttgttttcaaagcttgatgtggtgagtagtgaacatttgggcccg
tttcccaatgttacttctaagaagaactttatcattgaatcatttatccagcagtggaaa
caatttattggcaatgatattttcccagcagcacgattaatcttccctaatagagataag
agactctactttatcaaagatgtggtgcttgcaagattggtaataaaaatgtttaacata
cccaaaaattcaatagattacgataaattgttcaactataagaagcattatcatgattat
atgcatttaaatagatatgcaaataagcatctaaggtcattgccattgattatttcccaa
attatttctgaaagacgtgaccctagtaagattgtcaagtccacattcaccatcaaccaa
attaatgaaattctagatgagctctgttctccagaagcaaccaagagtgagatacaaatc
ggaatactaaagccagtgatagagaaattaactattgaagagatcagatggttcactact
atgattttgaagaaatcaatacttgcatcattcgaagttattttcttcagggcatggcat
cctgatgctcccaggttgtttaatatatgtaataatttgtcaaaagtgttttggttgtta
acagatcccgaaaaaaggcttgacccagatcaattgaatgttcagttgatgtatccattt
ctaccacaattgtctcaaaagctctcgatttcgtatgatcagttgtgcaacaagatgaat
aatgagttctttattgaagagaaaatggatggagacagaatgattatgcatatggaaaat
aataagtttaaatttttctccagaaggactaaagattatacactattgtatgggtcaaat
ttacagattggatccttaacaaagcatttacgtgatgctttcgatcctaaggttaaaagt
attattcttgacggtgaaatggttgcttgggactacaaaaggaatttaatattgccattt
ggtactttaaaggcttcggctgttcaagaagctgttcgccaatttacaacgactgatgtt
tttgaacagcagtcttcctggcctttatttataatattcgatatattgcatttaaatggt
aaagacttaactaggtatccattgttttaccgtaaagatttgttgcataaagtaatcaat
ccaattccacataaattcgagatcttacaattcatcaaatgcaaagatgccaacgacatc
aagttagcaatcagaaatattatttcagaacgaagtgaagggattatggtcaagaataca
aagctgaattaccatgttgcttcaagaaataactgctggattaaaatcaaacccgaatat
ttagaacaatttggtgagaatcttgacttggtggtaataggaattataccaggaatcaaa
aactcatacatttgtggcttgagggactctgatgataatgatattttcaagtcgttctgt
actgtcgcaaatggcttttccgaaaatgaatttaacaagatagaaaggttgacaaccgga
aaatgggttgagtataagaagcgtcctccgccggatgatcttttaaagtttggtacgaag
aaaccaacatcttggatccatccgaatgaatcagtagttttggagatcaaggcgagatct
attgattgcacttatttaagcacctacgcggttgggacaacattgcataacctttattgt
agaggtattcgtgaggataaactgtacgatgagtgtatcacattaaatgaatacaaggaa
ataaaattaaagtattcgagcgaattcaataaatcacaatccattgttaaaaataggaaa
cgattcattaattcttttgaagaaaaactaaccaatgataagcgaaggcaaatcgaggtg
atttctaagctatttgggaattttaaatttctaatactttccgataagctaaatcttacg
gataatgaacgaatttcaatcttggagatcggtaaaactatcaaaagatatggtggtgca
attattcataatcctttgaaccaatcaggagataaacaaattgtgactcttagtgaaaaa
ctcacgaccaaatgtgagatctacttaaagaaaggttttgatattattatgcctgagtgg
gtatttgaatgtataagaagaaactcgattgtacctttggagccttcattcatcttggat
agtataaacccaactattgttgaaaatgctcgtaatcaagtagatggatttggtgatagt
tatgttatcaatgttcgtgagccggttttcacgttcgtccaaagactaaaaataccacac
tctttatctaaagaaaaatttcatgagtatacagatgatttcataaatgaattaaatcgt
caagatataagtcttcctatcggctttttattctataatattaatttctacttagttgat
gccactacagtttgtgaatggcaactgaaaatactagagaggaaaattgaacggtttcaa
ggtaagatatcgtcacatttacctgagtgttcatttattattgtctcaaacgcttcaaat
caagattcgctgttgagagacgatttgttgtccagggtcaattccctcagtaaagagatt
agtcagtctgttgatttcggtacccaaggtatgtccaagattcctagagtagtaaatgag
acttttattgatcaatgcataaagtacaacgtattagttgaccctcaagaccatctattt
gtttag
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