Debaryomyces hansenii: DEHA2G23254g
Help
Entry
DEHA2G23254g CDS
T01026
Name
(RefSeq) DEHA2G23254p
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dha
Debaryomyces hansenii
Pathway
dha03022
Basal transcription factors
dha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DEHA2G23254g
09124 Replication and repair
03420 Nucleotide excision repair
DEHA2G23254g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dha03021
]
DEHA2G23254g
03400 DNA repair and recombination proteins [BR:
dha03400
]
DEHA2G23254g
Transcription machinery [BR:
dha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DEHA2G23254g
DNA repair and recombination proteins [BR:
dha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DEHA2G23254g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
8999303
NCBI-ProteinID:
XP_002777731
UniProt:
Q6BGW8
LinkDB
All DBs
Position
G:1885702..1887249
Genome browser
AA seq
515 aa
AA seq
DB search
MSSSNLFKATVNEHLEGLPKQVQSRLYEAPATCLSIYRLLPPIAKFYIMTMLFYETPVAL
KDLDKWCKPTSRKFQFDSLKRLRALHLIEEDSSGSHIRLHPTFRQNFRDCLTGSQARNAF
GNLSTTPDEQSVSIKFLDSFALQKWESILHFMVGTELSVTPSNSVLSLLKSGGLMEGTNK
GGNRLNITNSGFQFLLQDINAQIWTLLLQYLNLTQDLNMDPVDVLNFIFILGSLELGKGY
TVSSLSETQISMLADLRDYGLIYQRSENSERFYPTRLATTLTSDSAALKSPSMAMEQALE
STTETEEQQNLASNSNQGTIILETNFKIYAYTNSPLEIAILNLFVHLKTRFSNMVCGQIT
RESIRNALYNGITADQIIKFLETHAHSQMKILAKERLDKKIEFDTSNNINTAGGAPQSQM
MTNENGTTVAQHKLEVLPPTVVDQIKLWQLELDRIQTFEGYLFKDFASQQEFEALSNYAS
EIGVLLWSNKSKMKFFVTKDGISQVADFASRNQRR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctagtaacttattcaaagctactgttaacgagcatttggagggactaccaaaa
caagtccaatcaagattatatgaggcaccagcaacatgtctatcgatttatagattatta
cctccaatagctaaattctacataatgacaatgttattttatgaaacgccagtggcattg
aaggatttggataagtggtgtaagccaacgtcaagaaagtttcaatttgactcgttaaag
cgattgagggccttgcatctcatcgaggaagacagtagtggatcacatattaggttacat
cccactttcaggcagaatttccgtgattgtctcactggatcacaagctcgtaatgcattt
ggtaatttaagcacaacacccgatgaacaaagtgttagcatcaaattcttggactctttt
gcgctccaaaaatgggaaagtatattgcatttcatggttggaaccgaactaagtgtcaca
ccttcgaattctgtgttatcattgttaaaactgggtgggttaatggaaggaactaacaaa
ggtggaaataggttaaatatcactaattcagggtttcaatttttattacaagatatcaac
gcccaaatctggacattattattacaatatttaaatttaacgcaagacttaaatatggat
cctgtggacgtattgaactttattttcatattaggctctttggagttgggtaaagggtat
acagtttcaagtttgagtgaaacacaaataagtatgttggcagatttgagagattacggt
ttaatatatcaaagatcagaaaattccgaaagattttatcctacaagactagccaccacc
ttgacctccgattcagcggcattgaagtccccgtctatggctatggaacaagccttagaa
tcaactactgaaactgaagaacaacaaaatttggcatccaattcaaaccaggggacaatc
attcttgaaaccaattttaagatttatgcatatacaaattccccattggagatagcgatt
ttaaatctatttgtacatttaaagactcgattctctaacatggtatgtggtcaaatcaca
agagaatcgatcaggaatgccctatataacggtattaccgctgatcaaattattaagttt
ttggaaacacatgctcattctcaaatgaagatactagctaaagaaagattggataagaag
atagaatttgacactagcaataatattaacactgcagggggtgctccacagtcacaaatg
atgacgaatgaaaatggtactacggtagctcagcataaattggaagtattaccaccaaca
gtcgttgaccagatcaagctctggcagttagaattagatagaattcaaacatttgaggga
tacttatttaaagattttgcgagccaacaagaatttgaagcattgagtaattatgcttca
gaaataggtgttttactatggtcaaataagagtaaaatgaagttctttgttacaaaagac
ggaatttcacaggttgctgattttgctagtagaaatcaaagaaggtaa
DBGET
integrated database retrieval system
