Drosophila hydei: 111603134
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Entry
111603134 CDS
T05888
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dhe
Drosophila hydei
Pathway
dhe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111603134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhe03400
]
111603134
Enzymes [BR:
dhe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111603134
DNA repair and recombination proteins [BR:
dhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111603134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
ANAPC2
Motif
Other DBs
NCBI-GeneID:
111603134
NCBI-ProteinID:
XP_023176377
UniProt:
A0A6J1MH35
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MDISSTIKFRDICTMMKRVKEAKNTQRKELILKRYYTSFCKHRESFRQGANLTVNQAEDG
SSSFFPVLRLLLPGADTSRDNYGLQITALGRLYSRVLQVSKDSNEYIRLQNRTASSFRDY
GDVVFSVLQPRCHNEPSNLTLKQIHDMLDIIASEDTTVKERELTRFTELASAEEQKWLIR
ILLKAMGLGIGEQKIFGLLHPLAKDMYQRCSDLKRICILLADNKLGQEAPSGSTGIGRGT
SSSTSAVINLNTIIEPFQLIRPMLCERFPGKIESLMESDVLYLERKMDGERFQLHYARGM
FKYISRNGVDYTKSFGGSYEIGTLTPHLRTLLPLGMESIILDGEMMIWDTQQMRYREKGE
NTDVKHLKPERSWRPCFVVYDLLYLNGESLLDMTYVQRTYKLQELLTEQQGILQIMKAQK
ISSLDHFNTLFQQMLDSNAEGIVLKKQNSVYKPGVRVGGGWYKDKADYIEGLITEFDVLI
IGGFYNRKRTFIETFLLGVLKPGGGTERDEVFSIGCVANNTRQRGVLHNELKPHWRNAST
EPPPLWYHYRPNEKEGAPDVWIQPEKSIILQVKAADLSPNGAYSTPKSLHFPRIQLMRAD
KVWHECMTLEEYTQLCQGRGGIKKLNKRQASLSDFTTERKRQKMTPAERNRLGLAAYEKR
YDVQPLESNSQLFEGFTFCILSGSRGHSKQQLQALAAQNGGTIVQNPLPNDPKCICIAGD
PVYLVKRLTQQQPRTNDILRLDWLLRVANKQQIDLRPRDVLSATEALQLQFAKSFDKFGD
SFTDLFGSVDELQEVLQDISETELDSLDVNKHELEKLEQQLLGSANPNIFSKHYACMYNR
DADELARLLFIQRGGQLVSETQHQNPTLVLVCPSRLNRQDFEHWYQKHFTGQPVQAVSTD
WIRQSHRARCALPTTEYILKF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgagtactattaaatttcgtgatatttgcacgatgatgaagagagttaaa
gaagccaaaaatacgcaacgaaaggagctcattttgaagcgatattacacctccttctgc
aagcatcgagagtctttccgtcaaggcgccaatctaacggtaaatcaagcagaggacgga
tccagtagctttttcccagtgctacgccttctattacctggcgcagatacttcacgggat
aactatggcttgcagataactgcactagggcgactgtattcccgcgtattacaggtatcc
aaagattctaatgaatatatacgcctgcagaatcgtaccgcctcctcatttcgtgactat
ggagatgtggtgttctctgtgctgcaacctcggtgccacaacgagccgagtaatctgacg
cttaagcaaatccacgatatgctggacattattgccagcgaagatacaacagtaaaagaa
cgggaactgacacgctttacggaactggcttcggccgaagagcaaaaatggctgatacgc
atcctgcttaaggcaatgggcttgggcattggcgagcaaaaaattttcggcttgcttcat
cccttggcaaaggatatgtatcagcgttgttcagatttgaagcgcatttgtatactgttg
gcagataacaagctaggacaggaagcgccgtctggaagcactggcattggcagaggcacc
agcagcagcaccagcgcagttatcaatttgaacacaatcatcgaaccctttcagcttata
cggcctatgttgtgcgaaagatttccaggcaagatcgaaagtcttatggagtcggatgtg
ctttatttagaaaggaaaatggatggcgaacgctttcaacttcactacgctcgcggcatg
tttaagtacatatcccgcaacggtgtcgattatacaaaaagctttggcggtagctatgaa
atcggcactttgacgccacatctacgcacgctgctgcctctgggcatggagtcgattata
ctagatggcgaaatgatgatatgggatacacagcagatgcggtatcgcgagaagggcgaa
aacacagatgtgaaacatctgaaaccagagcgcagctggagaccctgttttgtggtctac
gacctgctctatctcaacggggagagtctactggatatgacatatgtacagcgaacttac
aagctgcaggagctgctcaccgagcagcagggaattctgcagataatgaaggcacagaaa
ataagctcacttgatcatttcaacacgctgttccagcagatgcttgattctaatgctgag
ggtattgtgctaaagaagcaaaactcagtttataagccgggagtgcgtgtaggcggtggt
tggtacaaggacaaggcggattatatagagggtctcatcactgagttcgacgtgctgatc
attggcggcttttataatcgtaaacgcacttttatcgaaacatttttgttgggcgtgctg
aaaccgggtggcggcaccgaacgagatgaggtatttagtattggatgtgtggccaataat
acgcgacaacgtggcgtcctccataatgaattgaagccacattggcgtaatgcgagcacg
gagccaccgccactgtggtatcactacaggcccaacgaaaaggagggcgctcccgacgta
tggattcagcccgaaaaatctataatattacaagtaaaggcagccgacttatcacccaat
ggtgcctactccacacccaagtcgctacactttccgcgcattcagttgatgcgcgctgac
aaggtgtggcacgagtgcatgacgcttgaggaatatacacaactgtgtcagggtcgcggt
ggcatcaagaaattgaacaagcggcaggcaagcctcagtgacttcacgacggaacgcaaa
cgacaaaagatgacgcctgccgaacgcaatcgcctcggattagctgcctatgagaaacgc
tacgatgtacagcccttggaaagcaactcacagctgttcgagggcttcactttttgcata
ttgagtggttcacgcgggcatagcaagcagcagcttcaggcgctggccgctcagaatgga
ggcaccattgtccagaatccgttgcctaacgatccaaagtgtatctgcatagccggtgat
cccgtttacttggtgaaacgtctgacgcaacagcagccacgcacaaatgacattttacgc
ttggattggttgctgcgtgtggctaacaagcagcagatcgacttgcggcccagagatgtg
ctgtccgctaccgaagcgctgcagttgcagtttgcgaaaagctttgataagttcggtgat
agttttacggacttgtttggcagcgtcgatgagctgcaggaagtgctgcaagacatcagc
gaaacagaacttgactctttggatgtgaataagcatgagttggaaaaactggagcaacag
ctgcttggtagtgccaaccccaacatcttctccaagcactatgcctgcatgtataatcgc
gatgcggacgagctggccaggctactctttattcagcgtggcgggcagttggtcagcgaa
acgcagcatcagaatccgactcttgtgcttgtctgccctagtcggttaaaccggcaagac
tttgagcactggtatcagaaacatttcactggacagcccgtacaggctgtcagcacggat
tggatacggcaatcgcatcgagcccgctgcgctctccccacaacagagtacatattgaaa
ttttag
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integrated database retrieval system
