Delftia sp. HK171: BO996_22085
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Entry
BO996_22085 CDS
T04584
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dhk
Delftia sp. HK171
Pathway
dhk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BO996_22085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhk03021
]
BO996_22085
Transcription machinery [BR:
dhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BO996_22085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APE50317
LinkDB
All DBs
Position
5015885..5016400
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AA seq
171 aa
AA seq
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MAAAPSHPDIALLYSDHHGWLVGWLRRRLGNPCDAADLAQDTFVRVLGKPQSLHGVREPR
AWLTTIAYGLVVDHTRRAALERACLDAIASLPEPLAPSAEERHLLIESLVRMDNLLAGLP
PKARSAFLLSRLEGLSYPEIALQLGVCLSSVEKYMAAAIRHCLALRRELTV
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgccttcgcaccccgacatcgccctgctctacagcgaccaccacggctgg
ctggtgggctggctcaggcgcaggctgggcaatccctgcgatgcggccgacctggcccag
gacaccttcgttcgcgtgctgggcaagccccagtccctgcatggcgtgcgcgagccgcgc
gcctggctcaccaccatcgcctacggcctggtcgtggaccacacccgccgcgccgcgctg
gagcgcgcctgcctggacgccatcgccagcctgcccgagccgctggcgccctcggccgag
gagcgccatctgctgatcgaatccctggtgcgcatggacaacctgctggccggcctgccg
cccaaggcccgcagcgcctttctgctctcccgcctggaaggcctgagctacccggaaatc
gccctgcagctgggcgtgtgcctgagctcggtcgagaaatacatggccgccgccatacgc
cactgccttgccctgcgcagggaactgacggtgtga
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