Dermabacter hominis: CYJ49_003830
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Entry
CYJ49_003830 CDS
T09110
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dhm
Dermabacter hominis
Pathway
dhm03420
Nucleotide excision repair
dhm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYJ49_003830 (pcrA)
03430 Mismatch repair
CYJ49_003830 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhm03400
]
CYJ49_003830 (pcrA)
Enzymes [BR:
dhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYJ49_003830 (pcrA)
DNA repair and recombination proteins [BR:
dhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYJ49_003830 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CYJ49_003830 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
AAA_16
Cadherin_2
Motif
Other DBs
NCBI-ProteinID:
WIK61510
LinkDB
All DBs
Position
complement(824771..827452)
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AA seq
893 aa
AA seq
DB search
MSSLFDDFPLPESFRALGEAGKGSKGEGGTGARAQSGGARGESDACPPPDEWDFSEDAPP
EDWETAFDEQVSQSPNPEAGVSFEPVPDEPEPVRHESFAAWGGRDEAALEEIVEGLNPPQ
RDAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRSGEALPGEILAITFTNKAASEMKERV
EALIGPAARYMWVSTFHSACVRILRRDAAAAGLKSTFSIYDSADSKRLITNIAKDMGLDS
KRHSPRAFQAKISSLKNELVTPEEYAAQAENAKNPAERTIAQIYTQYQERLRTANAVDFD
DLIALTVRLLAENPGIREGYRRRFRHVLVDEYQDTNTAQYRLVRELVGDDPHADLTVVGD
SDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQTILSAANAVIKENQGRRPKKL
WTDQGEGQQITLYVADDEQGEARYITRQIDALIDEGAKAGDIAVFYRANAQSRALEDQLI
RVGLPYKVVGGTRFYERREIKDAIAYLRVLTNPADEINLRRILNTPKRGIGERAEAAVSV
LAEQERISFGEALERASEAPGIATRSLGAIEKFVSLMSRVREKVEKGEGPSDVLEEILSE
SGYYASLQSSDDPQDESRLENLAELVSVAADFEADLAAAEAAASEFEEEPGGPEAPSGSL
VDQFLEKVSLVADSDQIPEGEDQFVTLMTLHTAKGLEFPIVFLTGMEDGTFPHQRTLADP
KELEEERRLAYVGITRARERLFITRASVRAAWGTPQFFPASRFLEEIPEALVHVARAGNA
RAYADFGGGFGGGFGGSDGWGTSSRRGPSVTGVGVGGGRRDVSRPSFGSGKKAKTASEIP
NLEVGDRVTHDSFGMGTVVSATGAGEKLQVEVQFREPHGKKRLLVRYAPITKL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctttttgacgattttccacttcccgaatccttccgcgcgctcggcgaggcc
ggaaagggaagcaaaggcgagggtggcacgggtgcgcgcgcgcagagcgggggtgcgcga
ggggagtccgacgcttgcccgcctcccgacgaatgggatttttccgaggatgccccaccc
gaggattgggaaaccgcgtttgacgagcaggtgtcgcaatcgcccaatcccgaggcgggg
gtgagctttgagccggttccggatgagcccgagcccgtgcgtcatgagagttttgcggcc
tggggcgggcgcgatgaggctgctctcgaggagatcgtcgaggggctcaacccgccccag
cgcgatgcggtcgaacatcgcggctccccgctgttgatcgttgccggggcaggctctggc
aagacccgcgtgctgacccgccgcatcgctcaccttttgcgaagcggagaggctcttccg
ggcgaaattctcgcgatcaccttcacgaacaaagccgcctccgaaatgaaggagagggtt
gaggcgctcattgggcccgcggcccggtacatgtgggtgtcgaccttccactcggcgtgc
gtgcgtattttgcggcgagatgcggccgcagccggcctcaagtccacgttctcgatctac
gactcggcagactccaagcggctcatcacgaacatcgcgaaggacatggggctcgactcg
aaaaggcactcgccccgggcgttccaggcaaaaatctcctctctcaagaacgagctcgta
acgcccgaggaatacgctgcccaggcggagaacgcgaagaatcccgccgaacggacgatc
gcgcagatctacacccagtaccaggagcggctgcgcacggcgaacgccgtggacttcgac
gacttgatcgcactgactgtgcgcctgctcgccgagaatccggggattcgcgaaggctat
cgccgtcggttccggcacgtgctcgtggatgagtatcaggacacgaataccgcgcagtac
aggcttgtgcgcgagctcgtcggcgatgaccctcatgcggacctcacggtcgtgggcgac
tcggaccagtcgatctatgcgttccgcggcgcgacgatccgcaacatcatcgagttcgag
caggatttcccgagcgcccgcacgatcgtgctcgagcaaaactaccgctcgacccaaacg
atcctcagcgccgcgaacgcggtcatcaaggaaaaccagggcaggcggcccaagaagctg
tggaccgatcagggcgagggccagcagatcacgctgtatgtggccgacgatgagcagggc
gaggcgcggtacatcacccgccagattgatgctctcatcgatgagggggcgaaggctggc
gacatcgcggtgttctatcgggcgaatgcccagtcccgcgcgcttgaggatcagctcatt
cgcgtgggtctcccgtacaaggttgtgggcggaacgcgcttttatgagcggcgagaaatt
aaggacgcgatcgcgtaccttcgcgtgctgacgaaccccgcagatgaaatcaatctgcgc
cgcatcctcaatacgccaaagcgcggaatcggcgagagggctgaggccgccgtgtcagtg
ctcgcggagcaggagcggatcagttttggcgaggcgctcgagcgtgcgagcgaagctccc
ggcattgcaacgcgctccctgggcgcgattgagaagttcgtgtcactcatgtcgcgcgtg
cgcgaaaaggtcgaaaagggcgagggcccgagcgacgttctcgaagagatcctgagcgag
agcgggtattacgcctccctccagagcagcgacgatccccaggatgaatcccgcctcgag
aacctcgcggagctcgtgagtgtcgccgctgacttcgaggcggatctcgcggccgccgaa
gccgcggcttccgagttcgaggaggagccgggcggccccgaggccccaagcggttcgctc
gtcgatcagttcctcgaaaaggtttcgctggtcgccgactccgatcagatccccgagggc
gaggatcagttcgtgaccctcatgaccctccataccgcgaagggcctcgagttcccgatc
gtgttcctcacgggcatggaagacggcaccttcccgcaccagcggaccctcgccgacccg
aaagaactcgaggaggagcgccgcctcgcctacgtggggattacccgagcgcgcgagcgg
ctgttcattacgcgtgcgagcgtgcgcgccgcgtggggcacgccgcagttcttccccgcg
tcccggttcctcgaagagatccccgaggccctcgtgcacgtagcgcgcgcaggcaacgcg
cgtgcgtacgccgatttcggcggtggctttggtggcggcttcggcggttccgacggttgg
ggtacttcgagcaggcgtggcccatctgttaccggcgtaggcgtcggcggcggccgccgc
gacgtatcgcggccgagtttcggttccggcaagaaggcgaagacggcgagcgaaatcccg
aacctcgaggttggcgaccgcgtgacgcacgacagcttcggcatggggaccgtcgtttcc
gcgaccggggcgggggagaagctccaggtcgaggtccagttccgggagccgcacgggaaa
aagcgcctcctggtgcgctacgcgccgattacgaagctctga
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