Dickeya poaceiphila: Dpoa569_003340
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Entry
Dpoa569_003340 CDS
T06188
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dic03009
]
Dpoa569_003340 (rlmE)
Enzymes [BR:
dic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
Dpoa569_003340 (rlmE)
Ribosome biogenesis [BR:
dic03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dpoa569_003340 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Reovirus_L2_MT1
Methyltransf_23
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QDX31349
UniProt:
A0A5B8HRX1
LinkDB
All DBs
Position
complement(3670844..3671473)
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AA seq
209 aa
AA seq
DB search
MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQTDKLFKPGMTVVDLGA
APGGWSQYVVSQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDDKVQV
VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDILAPGGSFVVKVFQGVGFDEYLREIRS
LFTTVKIRKPDASRARSREVYIVATGRKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaaagcgttctgcaagttccagtcgctggctgcaggaacactttagcgat
aaatacgtacagcaggcgcagaaaaaagggcttcgctcacgcgcttggtttaaacttgat
gagatacagcagacggacaagctgtttaaacccggtatgaccgtggtggatctgggggcg
gcgccaggtggatggtctcagtatgtcgtcagccagattggtggaaaagggcgcattatc
gcgtgcgatcttttaccgatggatcctattgttggagtcgatttccttcaaggggatttt
cgtgatgaattagtgctcaagaccctgctggaacgggttggagacgataaggttcaggtg
gtgatgtccgacatggccccgaacatgagcggtactccggcggtggatattccccgagcc
atgtatctggttgagcttgcgctggatatgtgccgggatatattagcaccgggaggcagt
ttcgtagtgaaagtatttcagggtgtgggcttcgatgagtatctacgcgagattcgttcc
ctgtttacgacggtaaagattcgtaagcctgatgcctcgcgagcccgatctcgtgaggtg
tacattgtagcgacaggccgtaaactgtag
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