Dietzia sp. oral taxon 368: C3V38_02795 Help Entry C3V38_02795       CDS       T05390                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism dit  Dietzia sp. oral taxon 368 Pathway dit03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:dit00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     C3V38_02795  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dit03400]     C3V38_02795 Enzymes [BR:dit01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      C3V38_02795 DNA repair and recombination proteins [BR:dit03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      C3V38_02795 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 DNA_primase_S DUF72 Motif Other DBs NCBI-ProteinID:  AVM63489 UniProt:  A0A2S0LT84 LinkDB All DBs Position 559577..562189 Genome browser AA seq 870 aa AA seqDB search MATKGQKESVKVDGRTVRFTHPDKVLYEATGTTKADVLEYYTAVAPLLITYAGNRPVTRK RWPDGTDADSFFEKNLPQHAPDWVPRVSIEHSSRTVTYPVLDSPATLAWFAQQAALELHV PQWTLTNGEPGRTRRIVIDLDPGEGVELDTTAKVALRVRDLLSEAGLEAFPVTSGSKGIH LYARLDKAVTAASASKVAKEIAQSLAKQTPDLVTATMKRSIRDGKVFVDWSQNSGAKTTV APYSLRGRAEPWVAAPRSWEELGDGGLTHLHWDEVLKRLDADGDLLDGLEGTVKKSGSAK KKASSSGPTSRAKKSSGGKKSSSSSDDEDPEPADTSSTDVEGCDAEPTSADAVVTSLEEY RRKRDRRKTPEPFEGEVETDRSGGDGPIFVIQEHHARRLHYDLRLEHHGVLASWAVPKNL PTEPKDRRLAVHTEDHPLGYETFEGTIPKGEYGAGHMTVWDRGTYECEKWREDEIIVWLD GEKVSGRYVLVRTSAEKNQWIVQYMKDQSPDSFYGGRDNPKSSYPDDDKRARGSGDSDSS DGKARSRSTDRSDSAARPDAPPLPMIPTAAEVTELPDDTWAFEGKWDGYRVTLATDGAQT RLVSRNGNSMDWLADGFPGLAEALERRAVLDAELVILDANGVPDFASLAKQAAAEGKDSS LPPVELFVFDVLEVDGVDLQKQAWERRREVLDLLAPALREVDRVHVPEVLDGPGDRALAE AEEYGWEGIVAKRRDSKYESGRRSKAWLKQKLLTTTEAVVGGWRPGKGGRSGSLGSLLLG LPAETGLAYIGRVGTGFTDKQARALLDELEPLRRRTSPFVEQLPADARRDAVWVTPKIVV EVRHQGFTDDGNMRQPSWRDIRRDKLPGDL NT seq 2613 nt NT seq  +upstreamnt  +downstreamnt atggcgactaaggggcagaaggagtcggtgaaggtcgacgggcgcaccgtgcgcttcacc caccccgacaaggtgctctacgaggccaccggcaccaccaaggccgacgtgctggagtac tacacggccgtcgcgccgctgctcatcacctatgccggcaaccggcccgtcacccgcaag cgctggcccgacggcaccgacgccgactccttcttcgagaagaacctgccccagcacgcg cccgactgggtgccgcgcgtgtcgatcgagcactcctcgcgcaccgtcacctaccccgta ctcgactcccccgcgactctcgcgtggttcgcccagcaggccgccctcgaactgcacgtg ccgcagtggaccctcacgaatggcgagccggggagaacgcggcggatcgtcatcgacctc gacccgggtgagggcgtggaattggatacgacggcgaaggtcgccctccgcgtccgagac ctgctgtccgaagcgggactcgaggcgttcccggtcaccagcggctccaagggcatccac ctctacgcccggctggacaaggccgtcaccgccgccagcgcctccaaggtggccaaggag atcgcgcagtccctcgccaagcagaccccagacctggtcaccgccaccatgaagcgctcc atccgcgacggcaaggtgttcgtcgactggagccagaacagcggcgccaagaccaccgtc gcgccgtactccctgcgcgggcgggccgagccgtgggtggccgcgccccgctcgtgggag gaactcggcgacggcggcctgacgcacctgcactgggacgaggtgctcaagcgactggac gccgacggcgatctcctcgacggcctcgaaggcacggtcaagaagagcggctccgccaag aagaaggcgtcctcgtccggcccgacgtcgcgggccaagaagtcgtccgggggcaagaag agctcgtcgtcgtcggatgacgaggaccccgagcccgccgacaccagctcgaccgacgtc gagggctgcgacgccgagcccaccagcgccgacgccgtggtcacgagtctcgaggagtac cgccgcaagcgggatcgccgcaagacgcccgagccgttcgagggtgaggtggagaccgat cgctcagggggcgacgggcccatcttcgtcatccaggagcaccacgcgcgccgcctgcac tacgacctgcggctcgaacaccacggcgtcctggcctcgtgggccgtgcccaagaacctg cccaccgagcccaaggaccggcggctcgccgtgcacaccgaggaccacccgctcggctac gagacgttcgagggcaccatccccaagggcgaatatggcgccggccacatgaccgtctgg gaccgcggcacctacgagtgcgagaagtggcgcgaggacgagatcatcgtgtggctcgac ggcgagaaggtctccggcaggtacgtactcgtgcgcacgagcgccgagaagaaccagtgg atcgtgcagtacatgaaggaccaatcgcccgactccttctacggcgggcgcgacaatccg aagtcgtcgtacccggacgatgacaagcgtgcgcgcggctccggcgactccgatagttcc gacggcaaggcacgttcgcgttccaccgaccggtccgacagcgccgcgcgccccgacgct cccccgctgcccatgatccccacggccgccgaagtgaccgaactgcccgacgacacgtgg gcgttcgagggcaagtgggacggctaccgcgtcaccctcgcgaccgacggcgcacagacg cgcctcgtcagccgcaacggcaactccatggactggctcgccgacggcttccccgggctg gccgaagcgctcgagcggcgggcggttctcgacgccgagttggtgatcctcgacgccaac ggcgtgccggacttcgcgtcactggccaagcaggccgccgccgagggcaaggactcgtca ctgccgccggtcgagctgttcgtctttgacgtgctcgaggtcgacggcgtggacctgcag aaacaggcgtgggagcgccgccgtgaggtgctggacctgctcgcgccggcactgcgggag gtcgatcgagtgcacgtgccggaggtcctcgacggccccggtgaccgcgccctggccgag gccgaggaatacggctgggagggcatcgtcgccaagcgccgcgactcgaagtacgaatcc ggccgccgttccaaggcctggctcaagcagaagctgctcaccacgaccgaggccgtcgtc ggcggatggcggcccggcaagggtggccgctccggctcgctcggctccctcctactgggc ctgcccgccgaaaccggcctcgcctacatcggccgcgtcggcaccgggttcaccgacaag caggcccgcgccctgctcgacgagctcgagccgctgcgccgcaggaccagccccttcgtc gagcaactgcccgcagacgcccgccgcgacgccgtctgggtgacgcccaagatcgtcgtg gaagttcgccaccagggcttcaccgacgacggcaacatgcgccaaccctcctggcgcgac atccgccgcgacaagctgcccggagacctgtag

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