Dietzia sp. JS16-p6b: CT688_06455
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Entry
CT688_06455 CDS
T05397
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz00470
D-Amino acid metabolism
diz00550
Peptidoglycan biosynthesis
diz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CT688_06455 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CT688_06455 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
diz01011
]
CT688_06455 (murD)
Enzymes [BR:
diz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CT688_06455 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
diz01011
]
Precursor biosynthesis
Amino acid ligase
CT688_06455 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AVZ41120
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Position
1428126..1429574
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AA seq
482 aa
AA seq
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MRDLTGARVLVLGAGVSGPGAVRILHALGAEPVVADSRPDAVALLQASLPEGVGCTGVGL
DRAAEMIADTGSGRIDLVVTSPGWRPDSPLLLSATEAGLELWGDVELAWRADAAGVFGPP
RTWLAVTGTNGKTTTTSMLESICREAGMAVRACGNIGLPVTEVLLAEPRVEVLAAELSSF
QLHWAPSCRPDVGVVLNVAEDHLDWHGSMEAYAAAKARVLTGRVAVAGNDDPIASRLLEE
APAPTRIGVRLGAPRDGELGVVDGVLTARIGDRGADDMVPLLPAVDVRPPGPAGVLDALA
AAAVAMSVGAEAEHVAAGLRGFTVAAHRAELVDMVDGVRYVDDSKATNPHAARTSLLAGG
MMVWLAGGLLKGADVDPLVAEVADVLRGVVLIGRDRARIAEALSRHAPGVPVVELASGDD
DGAAAPDEPQQTMDRAVAEAARMATGGDTVLLAPAAASMDMFTDYGHRGRSFALAVGRVA
GR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atccgcgatctcaccggagcccgcgtcctggtcctcggcgccggggtgtccggcccgggg
gcggtccggatactccacgcgctcggcgccgagcccgtggtggcggactcgcgaccggac
gccgtcgcgctgcttcaggcctcgctcccggagggggtgggctgtaccggcgtcggcctc
gatcgcgcggccgagatgattgccgacaccggctccgggcggatcgacctggtggtgacg
agcccggggtggcggcccgactccccgctgttactgtccgccaccgaggccggcctcgag
ctgtggggggacgtggaactggcctggcgggccgatgcggccggggtgttcgggccgccg
cggacctggctcgcggtgacgggtaccaacggtaagaccaccaccacctcgatgctcgag
tcgatctgccgggaggcgggcatggccgtgcgggcgtgcggcaacatcggcctgcccgtg
acggaggtcctgctcgccgagccgagggtcgaggtgctcgcggctgaactgtcgagtttc
cagctccactgggcgccgagctgccgacccgacgtgggggtggtcctcaacgtcgcggag
gaccacctggactggcacgggtcgatggaggcctacgccgcggccaaggcccgcgtcctc
accgggcgggtggcggtggccgggaacgacgacccgatcgcctcccgactactggaggag
gcgcccgcgcccacgcggatcggggtgcgcctcggcgcaccccgtgacggtgagctgggg
gtggtcgacggtgtcctcaccgcgcggatcggtgaccgcggggccgacgacatggtgcca
ctgctgccggccgtggacgtccgaccgccgggacccgcgggcgtactcgacgctctcgcc
gccgcggcggtggcgatgtcggtgggggctgaggcggagcacgtcgccgccggactccgg
gggttcacggtcgccgcgcaccgcgcggagctggtcgacatggtggacggggtccgctat
gtggacgactccaaggcgaccaatccgcatgcggcccgcacgtcgctgctcgcgggcggg
atgatggtgtggctcgccggcggactgctcaagggcgccgatgtcgaccccctggtggcg
gaggtggcggacgtcctgcgcggggtggtactgatcggccgcgaccgggcgcggatcgcg
gaggcattgtcccgacacgcgccgggggtgcccgtcgtggagctggcctcgggggacgat
gacggtgcggcggctcccgacgagccgcagcagacgatggaccgggcggtcgccgaggcc
gcgcggatggccaccggaggcgacaccgtgctgctcgcccccgccgccgcgtcgatggac
atgttcaccgactacggtcaccgcgggcgcagcttcgcgctcgccgtgggccgggtcgcc
gggaggtag
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