Dietzia sp. JS16-p6b: CT688_12495
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Entry
CT688_12495 CDS
T05397
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz00521
Streptomycin biosynthesis
diz00523
Polyketide sugar unit biosynthesis
diz00541
O-Antigen nucleotide sugar biosynthesis
diz01100
Metabolic pathways
diz01110
Biosynthesis of secondary metabolites
diz01250
Biosynthesis of nucleotide sugars
Module
diz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CT688_12495 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CT688_12495 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CT688_12495 (rfbC)
Enzymes [BR:
diz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CT688_12495 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AVZ41261
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Position
complement(2723275..2723934)
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AA seq
219 aa
AA seq
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MQLRELSVTGAWEITPRRISDDRGVFHEAFTDAAFRRLTGHRFDLAQVNVSVSGEGVLRG
LHYAEVPPGQAKYVMCPSGTVFDVVVDVRVGSPTFGEWSGVILDSEDQRAVYVPEGVAHG
FLSLEPQSTVMYLCSEGWRPGAEHGVDAFDPHLAVDWPSVALDGTPITHVMSGKDRDAPS
LLDAAAAGRLPRWEDCEAHVERLREATARVDEEWRPNAD
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcttcgcgagttgagcgtgacgggggcgtgggagatcaccccccgccggatctcc
gatgaccgcggggtcttccacgaggcgttcaccgacgcggccttccgccgcctgacaggg
caccgcttcgacctcgcgcaggtcaacgtgtcggtctcgggcgagggggtcctgcgcggc
ctgcactacgccgaggtgccgcccggccaggcgaagtacgtgatgtgcccgtccggcacg
gtgttcgacgtggtggtggacgtgcgggtgggttcgccgaccttcggggagtggtccggg
gtcatcctcgactcggaggaccagcgtgcggtgtacgtccccgagggcgtggcgcacgga
ttcctctccctcgagccgcagtccacggtgatgtacctgtgctcggagggctggcgaccg
ggcgccgagcacggggtggacgccttcgatccccacctcgccgtcgactggccctccgtg
gcgctcgacggcaccccgatcacgcacgtgatgagcggaaaggaccgagacgcgccgagt
ctgctcgacgccgcggccgccgggcgcctgccgcggtgggaggactgtgaggcgcacgtg
gaacgcctgcgggaggccaccgcgcgggtggacgaggagtggcgcccgaacgcggattga
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