Desulfurococcus amylolyticus 1221n: DKAM_1374
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Entry
DKAM_1374 CDS
T00817
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
dka
Desulfurococcus amylolyticus 1221n
Pathway
dka03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dka00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DKAM_1374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dka03021
]
DKAM_1374
Enzymes [BR:
dka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DKAM_1374
Transcription machinery [BR:
dka03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DKAM_1374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ACL11700
UniProt:
B8D6G9
LinkDB
All DBs
Position
complement(1273144..1275804)
Genome browser
AA seq
886 aa
AA seq
DB search
MSSKIVTNRISRIKFGILSPDEIRKMSVTQIFSSEVYDNDGSPIDGGVMDRRLGAIEPGE
TCPICGNTRDSCPGHFGHIELAKPVIHAGFAKQILIYLKATCRNCGRLKIPEEEKGEYLR
LLSDLQELGAPYLIKRFHEYIRRRASTADTCPHCGAKQYKVKLEKPHTFYEQTERGLLKL
TPSEVRGRLEKISNDDVKLLGGDPNDTRPEWMVLTVLPVPPRSVRPSVLLETGIRSEDDL
THKLVDIIRTNNRLREHVEGGAPSAIIEDEWELLQYHITTYFDNEVPGLPVAKHRSGKTL
KGIAQRLKGKEGRFRNNLRGKRVDFSARTVISPDPSLSINEVGVPEDVAKILTIPERVTP
WNIEEMRKLVLNGPEKWPGANYIVRPDGRKISLKFVDRKAAAESLESGFIVERHLMDGDI
VLFNRQPSLHRISVMAHVVRVLPYKTFRLNLLVCPPYNADFDGDEMNLHVPQSEEARAEA
RLLMLVERHILTPRYGGPIIGGLQDYISGAYILTSKTTLLDKDDVVDLLSSTGYKGELPE
PAILKPRALWTGKQLVSLFLPKDFNYKRNSKIGSAAALRCIDEDCPHDSLVIIRNGVLLE
GVLDKASIGREEPESLVHWLIKEYGEDYGRMFMDRVYKMFIRMSEKYGLTMSYTHLTLPE
EARNRLSEIIAGKKKEVEELISKYKRGELLARPGKTVEETLEDEIIDILSKKLLDSVAEV
ITPYFTLVNPVVIMARTGARGNPVNLTQMAALLGQQTVRGKRLTRGYLGRALSHFKPEDL
GPEARGFIASGFVHGLNPVEMFFHAAAGREGLIDTAVRTSQSGYMQRRLINALQDLRVEY
DGSVRLTTGEIVQLLYGEDGVDPMKSDHGKSVNVDRVIEKIFGGGL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcaaagatagttaccaataggatatcacgtataaaattcgggatactctcgcca
gacgagataaggaagatgagtgttacccagattttctcctccgaggtatatgataacgat
ggctcccctatagatggcggcgtaatggataggagactaggagctatcgagcccggtgaa
acatgtccaatctgcggtaatacaagggattcatgcccaggtcacttcggacatatagag
ctagctaaacccgttatacacgctggatttgcaaagcagatacttatatatttgaaggcg
acatgtagaaactgcgggagactcaagataccggaggaggagaagggcgagtacttgagg
ttgttaagcgatctccaggaactcggagcaccctacttaattaagaggttccacgaatac
attaggcggagggcgagcacagcggatacatgtccacattgcggtgccaagcagtacaag
gtaaagctggagaagccccacacattctatgaacaaaccgagagagggctcttaaagcta
acaccaagcgaggtgcgtggaagactcgagaagatatcgaatgacgatgtgaaactactt
ggcggagacccgaatgataccagacccgaatggatggttctaacagtactaccagtaccc
cctagaagcgtgaggccatcagtactcttagagacaggcataagaagcgaggacgactta
acacataagcttgttgacataataaggacgaataacaggctcagggagcatgttgagggg
ggagcaccaagcgcgatcatagaggatgaatgggaactacttcaataccatataaccacg
tactttgacaacgaggtcccaggattaccggttgctaagcatagaagtggaaagacattg
aagggtatagcacagaggctgaagggcaaggagggaaggttcaggaataacttaagaggt
aagagagtagatttctcggctagaaccgttataagtcccgatccaagcctaagcataaac
gaggtcggcgttcccgaggacgttgccaagatactcacaataccggagagggtgacgccg
tggaacatcgaggaaatgcgtaagctggtgttgaatggaccagagaaatggcctggagca
aactacatagtgagaccggatgggaggaaaataagcctgaaattcgtggataggaaggca
gctgctgaatcactggagtcgggcttcatagtagagaggcatttaatggatggagatata
gtattgttcaataggcagccatcattacataggatatctgttatggctcatgttgtaagg
gtcttaccatataagacgttcaggctgaacctactcgtgtgcccaccatacaatgccgat
ttcgatggagacgagatgaacctacatgtacctcaaagcgaggaggccagggctgaggca
aggctactaatgttggttgagagacatattctcacaccacgttacggaggccctataata
ggtggtctacaagactatataagtggagcatatatccttaccagcaagaccacactgctg
gataaagacgatgtagtagacctactctcttcgacaggttataagggcgagttacctgag
cctgcaatcttaaagccccgcgctctctggaccggtaaacagcttgtctccttattcctc
ccaaaggacttcaactacaagaggaactcgaagatcgggagcgctgcagcattaaggtgt
attgatgaggattgcccccacgacagcctcgtaataatcaggaacggcgtactacttgag
ggcgtactggataaggcgagtattgggagggaggagccagagagtctagttcactggctt
ataaaggagtatggtgaagactacgggagaatgttcatggatagagtctataagatgttt
ataaggatgtcggagaaatacggcttaacgatgagctatactcatttaacgcttccagag
gaggctaggaaccggttaagcgagataatagctgggaagaaaaaggaggttgaagaacta
atatccaagtataagagaggagagctactggcaaggccaggtaagacagtcgaggagaca
ctggaagatgaaataattgatatattatccaagaagctacttgacagtgttgccgaggta
ataacaccatactttacactagtcaaccccgttgtaatcatggctagaactggtgcgaga
ggaaacccagtcaatctgacccagatggccgccctacttggacagcagacagtaagagga
aagcgccttacaaggggctaccttgggagagcactatcccacttcaagccagaagacctg
ggtccggaggcaaggggtttcatagcaagcgggtttgtacatggattgaatcctgttgaa
atgttcttccatgccgcggctggtagagaggggctgatagatacggctgtcaggacaagc
cagtctggatacatgcagaggcgtttaataaatgcgttacaagacctaagggtggagtat
gatggaagtgtacgtcttaccacaggtgagatagtccagctactctatggtgaagatggt
gttgacccgatgaagagtgaccatggtaaatccgttaacgtagatagagtcattgagaaa
atatttggaggtggactataa
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