Delftia lacustris: I6G47_27315
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Entry
I6G47_27315 CDS
T06974
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dla
Delftia lacustris
Pathway
dla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6G47_27315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dla03021
]
I6G47_27315
Transcription machinery [BR:
dla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G47_27315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_24
HTH_28
HTH_5
HTH_29
HTH_IclR
GerE
HTH_40
HTH_36
MarR_2
MarR
HTH_AsnC-type
HTH_11
HTH_10
Xre-like-HTH
Sigma70_ECF
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QPS80647
UniProt:
A0A7T3DD99
LinkDB
All DBs
Position
5870912..5871433
Genome browser
AA seq
173 aa
AA seq
DB search
MPAADRALAPDVATLYSDHHGWLLGWLRKRLGNAFDAADLTQDTYVRLLGRSGAEIQAIR
EPRALLMTIAQGLAANLYRKRCVEQAYLDALALIPEAVAQSPEHRAIVLQTLVEVDRLLA
LLPLPVRQAFLLSQIDGMRQADIAAELGLSVPTVRRHIARAVVQVCFLDDDGA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccgaccgcgcccttgctcccgatgtcgccactctctactccgaccaccac
ggctggctgctgggctggctgcgcaagcgcctgggcaatgcctttgatgcggccgatctg
acccaggacacctatgtgcgcctgctgggccgcagcggcgccgagatccaggccattcgc
gaaccgcgtgccctgctgatgaccattgcccagggtctggccgccaacctctaccgcaag
cgctgcgtggagcaggcctatctggacgccctggccctcatacccgaggccgtggcccag
tcccccgagcaccgcgccatcgtgctgcagaccctggtcgaggtggaccgcctgctggcc
ctgctcccactgcccgtgcgccaggcctttttgctgtcgcagatcgacggcatgaggcag
gccgacatcgcggctgaactgggcctttccgtgcccaccgtgcgccgccatatcgcgcgg
gccgtggtgcaagtctgctttctggacgacgacggcgcatga
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