Delphinapterus leucas (beluga whale): 111175629
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Entry
111175629 CDS
T05885
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03015
mRNA surveillance pathway
dle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111175629 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
111175629 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dle03019
]
111175629 (PABPC4)
03041 Spliceosome [BR:
dle03041
]
111175629 (PABPC4)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111175629 (PABPC4)
mRNA cycle factors
Stress granule specific factors
111175629 (PABPC4)
Spliceosome [BR:
dle03041
]
Complex C
Other components
Complex C specific factors
111175629 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
RRM_3
ApbA_C
Motif
Other DBs
NCBI-GeneID:
111175629
NCBI-ProteinID:
XP_022431044
UniProt:
A0A2Y9N8D9
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQSLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctgtacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgacatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggcgtgggaaat
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttttcg
gcttttggaaacattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaggaggctgccgacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gctgagcttggagccaaagctaaggaattcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctattcagccagtttggtaagactctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttatgaaaaa
cacgaggatgccaataaggccgtggaggagatgaatggaaaagaaatcagtgggaaagtc
attttcgtgggccgtgcacagaagaaagtggaacggcaggccgagttaaagcgaaaattt
gaacagctgaaacaggagagaattagtcggtatcagggggtgaacctctacattaagaac
ttggatgacaccattgatgatgaaaagttaaggaaagagttttctccttttggatcaatc
accagtgctaaggtgatgctggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatcccctgaagaggcaaccaaagcagtcacggagatgaacggacgcatcgtgggctcc
aagccactgtatgtcgccctggcccagagaaaagaagagagaaaggctcacctgaccaac
cagtatatgcagcgggtggccgggatgagagcgctccccgccaatgccatcttaaatcag
ttccagcctgcagctgggggctactttgtgccagcagttccacaggctcagggaagacct
ccatattacacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactacc
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
agcctagcgcctcgtgccgctgttgccgccgctgctcctcgggctgttgcaccttacaaa
tacgcctccagtgtccgcagccctcaccccgccatccagcccctgcaggcaccccagcct
gcggtccacgtgcaggggcaggagccgctgaccgcctccatgctggccgcagcacccccg
caggaacagaaacagatgctgggtgaacgtttgttcccgctcatccagacgatgcactca
aacctggctgggaagattacggggatgctgctggagattgacaactcggagctgctgcac
atgctggagtcccccgagtctctccgctccaaggtggatgaagctgtggcggtcctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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