Desulfonema limicola: dnl_16480
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Entry
dnl_16480 CDS
T07101
Name
(GenBank) Putative pyruvate carboxylase subunit B, PycB-like
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
dli
Desulfonema limicola
Pathway
dli00020
Citrate cycle (TCA cycle)
dli00620
Pyruvate metabolism
dli01100
Metabolic pathways
dli01120
Microbial metabolism in diverse environments
dli01200
Carbon metabolism
dli01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
dnl_16480
00620 Pyruvate metabolism
dnl_16480
Enzymes [BR:
dli01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
dnl_16480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
HlyD_3
GCV_H
Rib_recp_KP_reg
Motif
Other DBs
NCBI-ProteinID:
QTA79380
UniProt:
A0A975GFN9
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All DBs
Position
complement(1759191..1761206)
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AA seq
671 aa
AA seq
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MSDQVTMTEMNYGPDRPAAKNPVKIMDLSLRDGHQSLFATRGRTEDMIPVAELMDEIGFW
AIETWGGATFDTMHRFLNEDPWERLRTLKRYIKKTPFSMLLRAQNLVGYRNYADDLAEVF
VERAAENGMDVFRTFDALNDYRNFETVVKGIKKAGKHFQGCICYTMTEPRLGGDVYNLDY
YVNKAKDLESMGADSICIKDMAGLIAPYDAYKLIKALKEAVKPPIHLHSHFTSGMSPMSH
LKAIEAGVDIVDTCMTPYAYRTSHAAVEPLVMALLGTNRDTGFDIKKLAVINEILEKEVM
PKYKHLLDDSKVSVIDINVLLHQTPGGMLSNLVNQLREMDALDKIGEVYKELPRVRKDLG
QIPLVTPTSQIVGIQTVNNVLFDDENERYKMITGQVKDLCYGLYGKTAVPINPEVQKKAL
KGYPRGEEPITCRPAEVLEPELEKASKEIGDLAKDIDDQVLYAIYPVTGKKFLKWKYGVE
APPKDVLPRTLEDVKKQDELIKKAKAGLLYEKKDAPEKGKATRKFNVFIDGDYFEVDVDE
PGGAPVIAYQAPAAAPAAAPAPAAAPSAPKPAAPAAPRPAPAAPKPAAPKPAAPAASAAV
DGTPLKAPMPGMIVSYSKAVGDAVKAGDTVVVLEAMKMENALSAPCDGTVKAINFTSGDS
VAKNDVLAVIG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaagtaacaatgaccgaaatgaattacggccctgacagacctgctgctaaa
aatccagttaagataatggatctgtctctgcgcgacggtcatcagtccctgtttgccacc
cgcggcagaacagaagatatgattcctgttgccgagcttatggatgaaataggtttttgg
gcaatagaaacctggggcggtgctacctttgatactatgcacagattccttaacgaagat
ccctgggaaagactccgcactttaaaaagatatattaagaaaactcctttttccatgctt
ctcagggcacagaacctggttggatacagaaattatgctgatgatcttgcagaggttttt
gttgaaagagcagcagaaaatggaatggatgttttcagaacctttgatgctcttaatgac
taccgcaattttgaaaccgttgttaaagggattaaaaaagcaggaaaacatttccagggc
tgtatctgctacaccatgaccgaaccccgcctcggcggcgatgtttataatctggattat
tatgtcaacaaggccaaagatctggaatcaatgggcgctgacagtatttgtatcaaggat
atggcaggtctgattgctccctatgatgcatataagcttatcaaggctttgaaagaggct
gttaaacctcctattcatctgcacagccattttacctcgggcatgtctccaatgagtcat
ctcaaagccattgaagcaggagttgatattgttgatacatgtatgactccttatgcttac
cgcacatctcatgcagcagttgagcctctggtaatggcacttctgggaaccaacagggat
accggctttgatattaaaaaactggctgtaatcaatgaaattcttgaaaaagaggtaatg
ccaaaatataagcatctgctggatgacagcaaggtttctgttattgacattaacgttctt
ctccatcagacacccggcggaatgctttccaacctggttaatcagctccgcgaaatggat
gctcttgataaaatcggtgaagtttacaaagagcttcccagagttcgtaaagatctgggc
cagattcccctggttacacctaccagccagattgtgggtatccagactgtcaataacgta
ctttttgacgatgaaaatgagcgttacaagatgattacaggccaggttaaagacctttgc
tacggcctgtatggtaaaactgcagttcccatcaatcccgaggttcagaaaaaagctctc
aaaggctatccaagaggtgaagaacccattacctgccgtcctgctgaggtattggaacct
gaactggaaaaagcaagcaaagaaatcggtgatctggctaaggatattgacgaccaggta
ctctatgccatttatcctgtaacaggtaaaaaattcctcaaatggaaatacggtgttgag
gctcctcccaaagatgtactgcccagaactctggaagatgttaaaaaacaggatgaactt
atcaaaaaggcaaaagcaggcctgctgtacgaaaagaaagatgctcctgaaaagggcaaa
gccacccgcaagttcaacgtatttattgacggcgattactttgaagttgatgttgacgaa
ccaggcggcgctcctgttattgcataccaggcaccggcagcagctccggcagcagctcca
gctccggcagcagcaccttctgcaccaaaaccagcagctccggcagctcccagaccagca
cctgctgcaccaaaaccggcagctcccaaaccagcagctccagcagcttctgccgctgtt
gacggaaccccgctgaaagcaccaatgccgggcatgattgtcagctattccaaagccgtg
ggcgatgctgtaaaagccggtgacactgtggttgttctggaagccatgaaaatggaaaat
gccctgtctgctccatgtgatggaacagtaaaagctattaattttacaagcggtgattct
gtagctaaaaatgacgtacttgccgtaatcggataa
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