Desulfonema limicola: dnl_58920
Help
Entry
dnl_58920 CDS
T07101
Name
(GenBank) Beta-ketoacyl polyketide synthase domains-containing
Organism
dli
Desulfonema limicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
KAsynt_C_assoc
ACP_syn_III
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
QTA83482
UniProt:
A0A975BDF5
LinkDB
All DBs
Position
complement(6301447..6305022)
Genome browser
AA seq
1191 aa
AA seq
DB search
MNKKIAIIGISCLLPGALNYKEYWDNLISGRDSKSMAGVEQMGVDPKEYFDPAKGTADKF
YCMEGGYIRDFKFDPSGYFLPEHDIEKLDDLFKWSLYTAREALKDSGYLDRHENCGIILG
NLSFPTRYSNHLFIPIYHRAVESSLKKLLKDENFKLPCFTNPEHVSDENAMISGYPSALI
AQAFNLSGTCFSIDAACSSSIYSIKLACDYLLSGRADMMLAGAVSAADPFFVSMGFSIFQ
AHPNIPGSSPLDKNSRGLVAGEGAGMFVLKRYEDAVNDGDKIYACILGTGLSNDGRGQSV
LSPSADGQNIAFERAYERAGINPKEIAYVECHATGTPLGDKVELDSMDTFFGKYGASPLV
GSSKSNLGHLLTAAGMSGMIKTILAMSHKKIPATINLKHAHSSKNNVISASQIPNTLTPW
PQKTDLIHAAVSGFGFGGTNGHIVLEYDKNQEKKTDPGSFEKKEKQPCPMAIIGMDALFG
NSRGIAEFHQTTYDGLQHFIPLPEKRWKGIDQYKDILQDFGFKNGKPPKGAYIDKFELDF
LRFRIPPNKDDRLIPQQLITLKVADNAIREARLEQGSNVAVLVAMGTELALHQFRGRVNL
TTQLQEILPCPDKADDRINILKSNIKESIHGVAKVNQYTSFIGNIMASRIASVWDFSGPA
FSISSEENSVFKSLETAQLLLENSEVDAVVVAGVDLAGGFENVLLKNRQTGMNTGRPTLS
FDKNSNGWMVGEGAGAVVLKSLDAARKQGDIIYAGINAVEFSKGIDSAAVQAACKKAFKT
AKVSPSDVNYLEVHASGIPEQDQAEISGLLGAYQDSGQKLKCAIGSAKANIGHTFAASGM
AGLIRTALCLYNRFIPKTPGWSGPKQPEQWEKSPFFVPTESRTWFADGTRPRIAAINSMG
DDRACVHLILKDEPGQSQRKSDYFTRVSPCLIILAGDNFQDIESGLEGLASELDSDKDLP
LTAKDFYKTFLQNTSAPYRLCLTGQSKNEIHEEIEAAKSGIKQALKDNAEWSSERGSYFT
PEPLGSEGKIAFVYPGGFNSYIGLGRNLFQLFPDVYEKAGDYTSQLGDLLGSEILYPKSM
TSLSEEEIKAMSAQLFNTPAVMFESGIMSAILYTDIIRESFGISPNQALGYSMGEVSMLF
ALGVWDRTDQISKTLRESPVFQSRITGSMENVRKAWNLQDSEKRRSGTAIN
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatagcaataatcggaatttcctgcctgctgcctggggcattgaattat
aaggaatactgggataacttgatttcaggcagagattcaaaatcaatggcaggggttgag
cagatgggagttgatcccaaagaatattttgatcctgcaaaaggaactgctgataaattt
tactgtatggaaggcggttatatccgggattttaaatttgatccatcaggctattttctg
ccggaacacgatattgagaaactggatgatctttttaaatggtctctttatacggccagg
gaagccttaaaagacagcgggtatctggacaggcacgaaaactgcgggattatactgggt
aatctttcttttcccacaagatattcaaatcatttgtttattcccatttaccacagggct
gttgaatcttctttaaaaaaactccttaaagatgaaaatttcaaacttccctgttttaca
aatcccgaacatgtatcagatgaaaatgccatgatctcaggctatccgtcagccttgatt
gcacaggcatttaatctttcaggaacctgcttttcaattgatgcagcctgttcgtcttcc
atttattccataaaactggcctgcgattatctcctgtccggcagggctgacatgatgctt
gcaggggctgtaagtgcagcagatcctttttttgtgagtatgggtttttcaattttccag
gcacatcccaatattccagggtcttctcctcttgataaaaattcaagggggcttgtagca
ggcgaaggtgccgggatgtttgtgctgaaacgctatgaagatgcggttaatgacggcgat
aaaatctatgcctgcattcttggaactggtctttccaatgacggacgtggacagtccgta
ctttcaccaagtgctgacggacagaatattgcttttgaacgcgcatatgaaagagccgga
ataaatcccaaagaaatcgcatatgtggaatgccatgcaaccggaactccccttggagac
aaggtggaactggattcaatggatacatttttcggtaaatacggggcatcaccccttgtg
ggatcatccaaatccaatcttggacatttgctcacggcagcaggcatgtcaggcatgata
aaaaccattcttgccatgtcccataaaaagattccggcaacaattaatctgaaacatgcc
catagttcaaaaaacaatgttatatcagcaagccagataccaaatactcttaccccctgg
ccccaaaagactgatttaatacacgctgctgtgagcggatttggttttggaggaacaaat
ggtcatattgtcctggaatatgataaaaatcaggaaaaaaagacagatccagggtctttt
gaaaaaaaagaaaaacaaccttgtcctatggcaattatcggcatggatgccttgtttggc
aattccaggggtatagctgagtttcaccagacaacctatgacggattgcagcattttata
cctctgcctgaaaaaaggtggaaaggtattgaccagtataaagatattttacaggatttt
ggctttaaaaacggtaaaccgcccaaaggtgcatatattgataaatttgaacttgatttt
ctaaggttcagaattcctccaaataaagacgacaggctcattccccagcagttaataacc
cttaaagtggcagataatgctattcgtgaagccagacttgaacaaggcagcaatgtggct
gttcttgtggctatgggaacagagctggcactgcatcagtttcggggacgggtcaacctg
acaacccagttacaagaaatccttccttgtcctgataaagctgatgacaggattaatatc
cttaaatccaatattaaagaaagtatccacggtgttgccaaggtaaatcaatataccagt
tttataggaaatattatggcctcccgcatagcttctgtctgggatttttcagggcctgcg
ttcagtatttcttcagaggaaaattctgtgtttaaatcccttgaaacagcacagctgctt
ctggaaaattcagaggttgatgctgttgttgttgccggggttgaccttgcaggcggattt
gagaatgtgttattaaaaaatcgtcagactggaatgaatacaggccgcccaaccctgagt
tttgataaaaattcaaacggatggatggtgggcgaaggagctggagctgttgttctcaaa
tctcttgatgcagcacgaaaacagggagatattatttatgcaggcataaatgcagtagaa
ttttcaaaaggcatagatagtgctgctgtgcaggctgcatgtaaaaaagcctttaaaaca
gctaaggtcagtccatcagatgtaaattatctggaggttcatgccagcggaattccagaa
caggatcaagctgaaatatcgggcctgctgggtgcatatcaagattcaggacaaaaatta
aaatgcgctattggaagtgccaaagctaatataggccatacctttgcagcatcaggcatg
gcaggtcttataagaacagctctctgcctgtataaccggtttatcccgaaaactccagga
tggtcaggccctaaacagcctgaacaatgggaaaaaagtcctttttttgttccaactgaa
tccagaacatggtttgctgacggaacaagaccgcgtattgcagctataaacagcatgggt
gatgaccgagcctgtgtccatcttatccttaaagatgaaccaggacagagccagagaaaa
agcgattattttaccagggtttccccatgccttattatcctggctggtgataatttccag
gatattgaatcaggacttgaaggtcttgcatcagagcttgattctgacaaagacctgcct
ttaacagcaaaggatttttataaaacctttttacagaatacatctgctccataccggctt
tgtcttacgggccagagtaaaaacgaaatccatgaggaaatagaagcggcaaaatcaggc
attaaacaggcattaaaagacaatgcagaatggtcgtcagaaaggggcagttatttcacc
cctgagcctcttggcagcgaaggcaaaattgcctttgtatatcctggcggatttaattcc
tatattggtcttggcagaaatcttttccagctttttccagatgtttatgaaaaagcaggg
gactatacatcccagcttggcgacttgctgggaagcgaaatactttatccaaaaagcatg
accagtttgtcagaagaagagattaaagccatgtctgcccagctttttaacacaccggca
gttatgtttgaaagcgggataatgtctgccattctttatacagatattatcagggaaagc
tttggaatatcacccaaccaggctctgggttacagtatgggtgaagtatccatgcttttt
gctctgggcgtatgggacaggacagaccagatcagcaaaaccctgcgcgaatcccctgtt
tttcaatccaggataacaggctccatggaaaatgtaagaaaagcctggaatctccaggat
tctgaaaaaagaagatctggtacagctataaattag
DBGET
integrated database retrieval system
