Desulfonema limicola: dnl_63620
Help
Entry
dnl_63620 CDS
T07101
Name
(GenBank) Nickel-dependent hydrogenase
KO
K23549
uptake hydrogenase large subunit [EC:
1.12.99.6
]
Organism
dli
Desulfonema limicola
Pathway
dli00633
Nitrotoluene degradation
dli01120
Microbial metabolism in diverse environments
dli02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
dnl_63620
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
dnl_63620
Enzymes [BR:
dli01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
dnl_63620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
QTA83936
UniProt:
A0A975GJT1
LinkDB
All DBs
Position
6809145..6810725
Genome browser
AA seq
526 aa
AA seq
DB search
MSKKQIIQVPLNRVEGDLEIRAEVKDGYVVDAWSSGTMYRGFESILKGRGALDGLVITPR
ICGICNTSHLAAAARALNMIASISPPPDAVKIINLALMTEHIQSDIRHGILMFCPDFVNP
AYKHLPLFEEAVKRFSPFKGESVRQVIRETKKILELSAIIGGQWPHSSFIVPGGIVSNPD
DTDILKCKIILHQYKNWYEKQILGCTIERWLQVESVHDLDTWLEEKDSHRQSDLGFYIRY
AKEIGLDKIGKGCQNFISYGAYEVPGNSDVKAHGNSSHLVPPGFFYKRYIEIFDQKHITE
HVASSWYMDYDRGKHPFEGETKPFASGKQGSKYSWAKAPRYNDLPGETGPLADMIISENR
LFTDYNEKNGPDVFIRELARLTRPSLLMPVMETWLSEISGKRIICLEEFRKTKDYKKPVV
SEIPGKEKFYISSGEIPDGRGFGMVGAARGSLGHWVSIADNMIKNYQIITPTAWNLSPRD
SDGVRGPAEEALLGTGVADISNPVQLGHVIRSFDVCMVCTVHAIEL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaacaaattatacaggttcctttaaaccgggttgaaggagacctggaaata
cgggcagaggttaaagacggatatgttgtcgatgcctggagttcaggaaccatgtacagg
ggatttgaatccatcctcaaaggaaggggcgcactggacgggctggtaattacccctaga
atttgcggcatatgcaataccagccacctggctgcagcggcccgggcattaaacatgata
gccagtatttcaccccctcctgatgcggttaaaataattaaccttgccctgatgaccgag
catattcaaagtgatataagacacgggatattgatgttttgccctgattttgtcaatcct
gcatataaacatctccctctttttgaagaagctgtaaaacggttttccccttttaaaggc
gaatcagtgcgccaggtgatacgggaaactaaaaaaatccttgaactcagcgccattata
ggaggccagtggccccattcatcatttatagttccaggaggcattgtttccaatcctgat
gacacggatattctcaaatgtaaaataattctgcatcaatacaaaaactggtatgaaaaa
cagatacttggatgcactattgaaagatggctgcaggtagagagcgttcatgacctggat
acctggcttgaagaaaaagattctcacaggcaaagcgatcttggtttttatatccgctat
gcaaaagagattggcctggacaagattggaaaaggctgccagaattttataagttacggt
gcttatgaagtccccggaaacagcgatgtaaaagcacatggaaacagttcgcatcttgtt
cccccgggatttttttataaaagatatatagagatttttgatcaaaaacatataacagaa
catgtagcatcttcctggtatatggattacgaccggggaaaacatccttttgaaggagag
accaaaccttttgccagcggaaagcagggcagtaaatattcctgggcaaaagctccccgt
tataatgatcttccaggggaaacaggccccctggcagatatgattatatcagaaaacagg
ctttttacggactataatgaaaaaaacgggcctgatgtttttatacgcgagctggcacgg
cttacaaggccctccctgcttatgcctgtgatggaaacatggctttcggaaatttcaggc
aaacgcattatatgtcttgaagaattcagaaaaactaaagattataaaaaacctgttgtt
tcggaaataccaggcaaagaaaaattttatatttcttcaggagaaatcccggacggccgg
ggattcggcatggtcggcgctgcaaggggttctcttggacactgggtaagcattgcagac
aatatgattaaaaattaccagattataacacctacagcatggaatctctcccccagggat
tcagacggggtaaggggacccgcagaagaagctcttttgggaacaggggtggcagatatt
tcaaatcctgtacaactgggacatgttatcagatcctttgatgtctgcatggtgtgtact
gttcatgccatagaactttga
DBGET
integrated database retrieval system
