Dehalogenimonas lykanthroporepellens: Dehly_0900
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Entry
Dehly_0900 CDS
T01264
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03420
Nucleotide excision repair
dly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dehly_0900
03430 Mismatch repair
Dehly_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_0900
Enzymes [BR:
dly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dehly_0900
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dehly_0900
MMR (mismatch excision repair)
Other MMR factors
Dehly_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADJ26202
LinkDB
All DBs
Position
complement(882622..884865)
Genome browser
AA seq
747 aa
AA seq
DB search
MKILADLNTAQRQAVEAIEGPVLIVAGPGSGKTRVITYRIAYLIKEVGIAPHRIMAVTFT
NKAAREMKERLEKLAPGSVKDITMGTFHAICAGILRKEGQAIGIAREFVIFDADDQEKLL
KRSAEEIGVDPKKFPLKTISGAISKAKSGMQTPEMFREKAHSYLEEIVGRMYEQYEKMLR
ANNALDFDDLLLKTVFLFQRRPEILKRYQERYVHIMVDEFQDTNLVQYELVKLLAGHYRN
IAVVGDPDQSIYSWRAADLRNVFNFEKDFPDRSVHYLEQNYRSTSKILEAASGIIAHNQK
RKDIKLWTENGSGEPLCILEAYNEQEEAQMVVREAEKLSASGQYKLSDMAVLYRTNAQSR
VLEEYFIRYGVPYKLVAGTRFYERREVKDLIAYFRLIHNPADSVSLMRIINVPARGLGDK
SIADLQNWARGQGLSLFEALAASAGEGEKPPLSARAIGAFASFYRMVESFIQAAAEKSLT
ELFDEILERTGYRAFLEAQPDGQERMENIAELHTVAEQFAALPPGEALSPFLESVSLVSD
IDNLDETEGGVTLITLHQAKGLEFPVVFIVGLEERVLPHFRSLDDPAQMEEERRLCYVGV
TRARERLYLLRAFRRNLMGGSMLNDPSRFLEAIPNELTTGTLPKAPPVHARTGASSPRSA
PPTIGRVGTPSTGRPPVSAGGPSQTRVPAGKPAVAPYKTGDKVAHPIFGDGVVISSMPVR
NDFEIVVSFKDVGLKKLLLGFAKLKRQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacttgctgatttgaacaccgcccaacgccaggctgtggaagccatcgagggt
cccgtcctgatagtcgccggccccggttccggcaagaccagggtcattacctaccgcatt
gcttatctgattaaggaagtgggcatcgcgccccaccggattatggcggtgaccttcacc
aacaaggccgcacgggagatgaaggagcggctggaaaaactggcccccggttcggtcaag
gacatcaccatgggtactttccatgccatctgtgccggcatcctgcgcaaggaaggccag
gctatcggtatcgcccgggaattcgtcatattcgatgccgatgaccaggaaaaactgctc
aagcggtcagccgaagaaataggcgtcgatcccaagaagtttccgttgaagaccatatcc
ggtgccatctccaaggccaaaagcgggatgcaaaccccggaaatgttccgggaaaaggcc
catagttacctggaagaaatcgtcggtcggatgtatgagcagtatgagaagatgctccgc
gccaacaacgccctggactttgacgacctactgctcaagaccgtctttcttttccagcgc
cggccggagatactcaagcgctaccaggaacggtacgttcatatcatggtcgatgagttt
caggataccaacctggtgcaatacgaactggtcaaactgctggccggccattatcgcaac
atcgccgtcgtcggtgacccggaccagtcgatatattcctggcgagccgccgatttgcgc
aacgttttcaatttcgaaaaagactttcctgaccggtcggtacattacctggagcagaat
taccgttccacttccaaaattctggaagccgcctccggcatcatcgcccataaccagaag
cgcaaggacatcaagttgtggacggaaaacggttccggggagccgctgtgtatccttgag
gcttacaatgaacaggaagaagcccagatggtggtacgggaggctgaaaagctcagcgcg
tccggtcaatacaaactatccgacatggcggtgttgtaccggaccaacgcccagagccgg
gtcctggaggaatacttcattcgttacggggtgccttacaagctggtagccggtacccgg
ttctatgaaagacgggaggtcaaggatctcattgcctattttcggctgatacataacccg
gccgattccgtcagtcttatgcgtatcatcaatgtgccggcacgggggctgggagacaag
tccatagccgacttgcagaactgggcccgcgggcaggggctgtctctgttcgaggctctg
gcggcttcggccggcgagggtgaaaaaccgcctttgagcgctcgggccatcggcgctttc
gcctctttttatcgcatggttgaatcgtttattcaggccgccgctgaaaaaagcctgacg
gaactattcgacgaaattctggagcgaacgggataccgggcttttttggaagcccagcct
gacggtcaggaaagaatggaaaacatcgctgaacttcatactgtggccgagcagttcgcc
gccctgccaccgggcgaggctttgtcgccgttcctggaaagcgtcagtctggtatcggat
attgataatctggacgaaaccgaaggcggcgtcaccctgataaccctgcatcaggccaag
ggactggagtttccggtggttttcatcgtcggtctggaggaacgcgtcctgccgcatttc
cggtcgctggatgacccggcacagatggaagaagaacgccggttgtgctatgtcggtgtc
acccgggccagagagcggctttatctgttgagggcgttccggcgcaatcttatgggtggc
agtatgctgaatgacccttcccggttccttgaagccattccaaatgaattgaccaccggc
accctgcccaaggcacctccggttcacgccaggactggggcttcttcgcccaggtcggcg
cccccgaccatagggcgagtggggactccctcaaccggcaggccgcctgtttccgccggg
gggccgtcacagacaagggttcccgcaggaaaacctgccgtcgccccctataagaccgga
gacaaggtcgctcacccgatattcggtgacggcgtcgtcatttcctccatgcccgtcaga
aatgatttcgagattgtcgtctcctttaaggacgtcggtctcaagaaactcctgctcggc
ttcgccaaattgaaacgtcaataa
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