Solidesulfovibrio magneticus: DMR_46140
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Entry
DMR_46140 CDS
T00917
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dma
Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dma03032
]
DMR_46140 (topA)
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_46140 (topA)
Enzymes [BR:
dma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DMR_46140 (topA)
DNA replication proteins [BR:
dma03032
]
Prokaryotic type
DNA Topoisomerases
DMR_46140 (topA)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DMR_46140 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Rad50_zn_hook
Toprim_2
LysW-like_globular
Motif
Other DBs
NCBI-ProteinID:
BAH78105
NITE:
DMR_46140
UniProt:
C4XSH3
LinkDB
All DBs
Position
complement(5232745..5235012)
Genome browser
AA seq
755 aa
AA seq
DB search
MGKDLIIVESPAKVKTIKKFLGNAYAVEASVGHVRDLPSKKLGVDEKDDFAPQYQIIPGK
QKVVSKLKEAAASASTIYLAPDPDREGEAIAWHVAQIVQEAGVPVHRIQFNEITAKAVRE
ALSHPRDINEKLFLSQQARRILDRLVGYKVSPILWQKVKSGISAGRVQSVALRLVVDREK
ERRAFVPVEYWNFKARLAADSPPEFEAELAKYQGKKLEIGSAEAAAAAEAAITGQPFVVT
AVTEKERKKSPPPPFITSTLQQAANQRLGYSAKRTMGAAQKLYEGLELGDSGTVALITYM
RTDSTRIADEARDAAREYITEALGPDYYPEKARHFRSKAGAQDAHEAIRPIDVRITPADV
KTLLPKDLFSLYKLIWERFVASQMAEARFWDTAVDVTAGPGLFKAKGQRLIFPGYLKVYG
QEAGDEAKSLPKLDKGQELTLLELKKEQKFTQPPPRYTEASLVRELEEKGIGRPSTYAAI
ISTLIDRDYARLEEKHFVPSELGETVSDLLAEHFVKIMDVGFTAGMEEALDAVADGRTDW
VNLLKDFTEDFNPTLAKAAKDMAKVKAGKETDVKCELCGKPMVIRFGKAGEFLGCSGYPD
CKNTKEFDRAPDGAVIPRERKAEEVASVGACPTCGKDLVVKKSRTGSRFIACTGWPDCKY
TKPLSTGVPCPKEGCSGTLVEKSSKRGKVFYACDAYPQCDFAVWDWPINEPCPQCDSKIL
VRKKTRDGELITCPSKSCRYKRAVGGKKDEGEGEE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaccttatcatcgtcgagtcgccggccaaggtaaagaccatcaagaagttt
ctcggcaacgcctacgccgtggaagcttccgtcggtcatgtgcgcgatcttccctccaaa
aaattgggtgtggatgaaaaagacgacttcgcgccgcaatatcaaatcattccgggcaag
cagaaggtggtttccaaactgaaggaagccgctgcctcggcttcgaccatctatctcgcc
cccgaccccgaccgcgaaggcgaagccattgcctggcacgtagcccagatcgtccaggaa
gcgggcgtgcccgtgcaccgcatccagttcaacgagatcacggccaaagccgtgcgcgag
gcgctttcccatccccgcgacatcaacgaaaagctttttctctcccagcaggcccggcgc
atcctggaccggctggtggggtacaaggtttcgcccatcctgtggcagaaggtcaaaagc
ggcatctcggccggccgcgtccagtccgtggccctgcgcctggtcgtggaccgcgaaaag
gaacgccgggccttcgtgccggtggaatactggaatttcaaggcgcgcctggccgccgac
tcgcccccggagttcgaggccgagctggccaagtaccagggcaaaaagctcgaaatcggt
agcgccgaggccgccgccgccgccgaggcggccatcaccggccagcccttcgtcgtcacg
gccgtgacggaaaaggaacgcaagaaatccccgccgccgccctttatcacctcgaccctg
cagcaggccgccaaccagcgcctgggctattcggccaagcgcaccatgggcgcggcccag
aagctctacgagggcctggaactcggcgacagcggcacggtggcccttatcacctacatg
cgtaccgactccacgcgcatcgccgacgaggcccgcgacgccgcccgggaatacatcacc
gaggccctggggccggactactacccggaaaaggcccgccattttcgctccaaggccggc
gctcaggacgcccacgaagccatccggcccatcgatgtccgcatcaccccggccgacgtc
aagacgcttttgcccaaggacctcttttcgctgtataagctcatctgggaacgctttgtc
gcctcccagatggccgaggccaggttctgggacacggccgtggacgtcacggccggtccg
ggactcttcaaggccaagggccagcgcctgattttccccggctacctcaaggtctacggc
caggaggctggcgacgaggccaagtccctgcccaagctcgacaagggccaggaactgacg
cttttggaactcaagaaggaacagaagttcacccagccgccgccgcgctacaccgaagcg
tcgctggtgcgcgagctggaggaaaaaggcatcggccggccctccacctacgccgccatc
atttccacgctcatcgaccgcgactacgcccggctggaggaaaagcacttcgtgccctcc
gaactcggcgaaaccgtctcggacctgctggccgaacacttcgtcaagatcatggacgtc
gggttcaccgccggcatggaagaggctctcgacgccgtggccgacggccgcaccgactgg
gtcaacctgctcaaggacttcaccgaggacttcaatccgaccctggccaaggcggccaag
gacatggccaaggtcaaggccggcaaggaaaccgacgtcaagtgcgagctgtgcggcaag
cccatggtcatccgcttcggcaaggccggcgagttcctgggctgctcgggctaccccgac
tgcaagaacaccaaggaattcgaccgcgccccggacggggcggtgattccccgtgaacgc
aaggccgaggaagtcgcctcggtgggggcctgccccacctgcggcaaggatctggtggtc
aagaagtcccgcaccggcagccggttcatcgcctgcaccggctggccggactgcaaatac
accaagccgctgtccaccggcgtcccctgccccaaggagggctgctccggcacgctggtc
gaaaaaagctccaagcgcggcaaggtgttctacgcctgcgacgcctacccccagtgcgat
ttcgccgtctgggactggcccattaacgaaccctgcccccaatgcgactccaagatcctc
gtgcgcaaaaagacccgcgacggcgaactcatcacctgccccagcaaaagctgccgctac
aaacgcgccgtgggcggcaagaaggacgagggagagggcgaggaatag
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