Drosophila melanogaster (fruit fly): Dmel_CG12176
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Entry
Dmel_CG12176 CDS
T00030
Symbol
DNAlig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Dmel_CG12176 (DNAlig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG12176 (DNAlig4)
Enzymes [BR:
dme01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Dmel_CG12176 (DNAlig4)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Dmel_CG12176 (DNAlig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
DNA_ligase_IV
BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
32322
NCBI-ProteinID:
NP_572907
FlyBase:
FBgn0030506
UniProt:
Q9VYA5
LinkDB
All DBs
Position
X:complement(13664584..13667811)
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AA seq
918 aa
AA seq
DB search
MSVDIASTIKFRDICSLFEKIKATQKVANKEEVLKSYYESFCRHRESFRRQTGLNNDQPE
DGASSFYSVLRLLLPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQHRNGNMYR
DYGDVVYSVLKPRCFNPPSNLRLKEIHQMLDTIANEDTEVKQQQLIRFTEQASPEEQKWL
IRLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASSSKDSKAA
VKFVNLNSVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYI
SRNGVDYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDV
KSLKPEGSWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSV
QEFNELFQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAF
YNRKRTFVDSFLLGVLQPAPPGSSNRPEVFSIGVVANNTKQRGVLNHTLKPHWHDVVNEP
PPLWFHYKPKERSGCPDLWIEPQNSVILQVKAADLAPNGAFFTRKSLHFPRTEMKRDDKT
WSECMTLKEFNDLCGGPLAIKKLNKRQLRLEDVTTKRKQMRMTPSERSRLGLAVYEKRYD
ASTSASTSKLFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDE
TFLVKRLILQQPRTCDIVRMEWLLRVCQKQELELKPRDLIAATEPLQQDLAECFDRHGDS
YTKDIANVEELQDLLQGIELTADNVAGITASNLNALEDQLLDGKKNLNMFRNLNAFFYSP
HGDEVAKLLFLQNGGRIVDDSDPQLNLGFICMSSDIDNDHFEHWLHNHSKLTTDKVLNSA
WIHQCHREGILLPMHSFV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagatatagccagcacgatcaagttccgggatatttgcagcctgttcgagaag
attaaggccacgcaaaaggtggctaacaaggaggaggtcctcaagagctactacgagtcc
ttctgtcgccaccgcgaatcctttcgccggcaaaccggattaaacaacgaccagccggag
gacggtgccagtagcttctattccgtgctgcgactgctgcttccgggtgcggacactggt
cgggatacctatggattgcagatcaccgcgctgggcaggctctacatcagggtgctccag
ctacccacggactccagcgatgccatcaggctgcagcaccgcaacggaaacatgtaccgg
gactacggtgatgttgtttattccgtgcttaagccaaggtgctttaatccgcccagcaat
ttgagactgaaagaaatccatcagatgctggacaccattgccaacgaggacacagaagtt
aagcagcagcaactcatccggtttacggagcaggcctcgcctgaggaacagaagtggcta
attcggttgctgcttaagagcctcgggctggggatcggtgagcaaaagattttcggtgtg
ctgcaccccaaggcgcaggatatctaccagcgctgctccgatctgggacatgtgtgcaat
ctgctggcagaccgaaccaccgacctagacgccagcagcagcaaggacagcaaggcggcg
gtcaagtttgtaaacctgaattccgtcatacggccattccaccagatacgtcccatgctg
tgcgaacgattccccggtgacatccaggagctgatgcagtcggatgtgctctatctggag
accaaaatggatggcgaacgctttcagctgcacatcgatcggggtcgtttcatgtacatt
tcccgcaatggagtggactacaccagaaactttggtcacagctacgatcacggcacctta
acgccaaagctgaggggacttctgccgctgggtctggagtctatcatactcgacggcgag
atgatggtgtgggataccaacaaactgcgctttcgggaaaaaggcgagaatacggacgtg
aagagcctgaagccggagggcagctggcagccatgtttcgtggtgtacgatctgctatat
tttaatggccagagtctgctggaccatacctacattcagcgggcgtacaaattgcagaaa
ctcatagttgaacagtcgggtgtgctgcagttgatgcgtgcacgcaaaatcggttccgtt
caagagttcaacgagctgttccagcaggcactcgactcccacgccgagggcattgtgcta
aagaagcagggatcaagatatcagcctggcgttagactgggcggtgggtggtacaaggac
aaggctgattacatcaaagggctgatcaccgagttcgatgtgctgatcatcggggcattc
tacaatcgcaagcgcacctttgtggactcatttttactgggcgttctccagccggcgccg
ccaggcagctctaatcgtcccgaagtcttcagtattggagtggttgccaacaatacgaaa
cagcgcggagtgctaaatcacacactgaaaccacattggcatgatgtagtcaatgagcca
ccgccattgtggtttcactacaagcccaaggagaggtccggatgccccgatctgtggatt
gaaccgcagaactcggtaattttgcaggtgaaagctgctgatctggcgcccaatggagca
tttttcacccgaaaatcgttgcactttccgcgcactgagatgaaacgggatgataagacc
tggagcgagtgtatgacacttaaggagtttaacgatctctgcggaggtcctttggccatc
aagaagttaaacaagcggcaactgcgactagaggatgtgaccaccaagcggaaacagatg
cgtatgacgccctcggagcgaagccgactgggattggccgtctatgagaagcgctatgac
gctagcacctccgctagcacttccaaacttttcgacggtctgagcttttgcattctgagc
ggatctgccggacgacacagcaagcatcagctgcaggagctggctgttaaaaacggtggc
tgcatcgtggaaaatcccctgcccaatgatccaaagtgtttttgcatcgcaggcgatgag
acgtttttagttaagcggctcatccttcaacagccacgcacctgtgacattgtgcgcatg
gagtggctacttagggtctgtcagaagcaggagcttgaactaaagcctagagatcttatt
gcggccactgaaccactgcagcaggatctggctgaatgttttgatcggcacggtgatagc
tacaccaaagacattgccaacgtggaggagctgcaggatctgcttcaaggcattgagttg
acagctgataatgtggctggcataaccgcatctaatctcaatgctctggaggatcagctt
ctggatgggaaaaagaatctgaacatgttccgcaaccttaatgcgttcttctacagtccg
catggtgatgaagtggctaagcttctgtttcttcaaaacggcggccggatagtcgacgat
tccgatccgcaactaaatctgggatttatctgtatgtcttctgacatcgataacgaccac
ttcgagcactggctgcacaatcattccaagttgaccactgacaaggtcttaaactcggcg
tggatacatcagtgccatcgcgaaggcatcctacttcctatgcattctttcgtctaa
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