Drosophila melanogaster (fruit fly): Dmel_CG17227
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Entry
Dmel_CG17227 CDS
T00030
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dmel_CG17227 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG17227 (DNAlig3)
Enzymes [BR:
dme01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Dmel_CG17227 (DNAlig3)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
Dmel_CG17227 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
41518
NCBI-ProteinID:
NP_650187
FlyBase:
FBgn0286075
UniProt:
Q9VG84
LinkDB
All DBs
Position
3R
Genome browser
AA seq
806 aa
AA seq
DB search
MLLSRLTWQARILTRLLCNKMASKGLHNEDNKLDTFRRICDEIAGESSYLKKAERLQRFF
EKGSSGKGFKGDTVLWVQFLIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGD
VSETLRKHFAASKKLKPQKQSKLYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDL
RTFIRLVKHDLRINARARHILDAFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKK
TKKTSSSAIQVMTPISPMLASPCKSVEDAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRALKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA
NAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTRELAAMT
ARVLHANLEGVVLKSPTSTYQPGKRNWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGG
TLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHKSLIKLTERADANAIPSWLLCSKS
LVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLANCSKDETAMNNKTTPEKEKKLNGNQSNGSKKLKRSNTGSDDED
GAPVLSKRKESKAIRSLSPSQKGLKDFFKPSKEFKSVVKKEPKEDEGNIESTSSKPQLFE
GLVAHFAMEKDSSKLMQQFSQHGGCCTTEPQKADLVFYANTNEALDLEKLRTLYRRSCRH
LNVSWLQSCLDTQSRQPFPLHAVMMK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgctattgtccaggctaacgtggcaggccaggattctaactcgtcttctgtgtaataag
atggccagcaagggattgcacaatgaggacaacaagttggacactttccgtcgcatctgt
gatgaaattgccggcgagtcaagttacctgaagaaagcggagagactgcagcgattcttc
gaaaaggggagcagtggcaagggcttcaagggcgacaccgtgctctgggtgcagttcctc
attccggcggccaatcagcgcgtctacaatctgcagaacaaggcgctgatcaaactcttt
tcgcgcatttttaatgcagatcaacagcaaatgcatctggatctagagcaggatggcgac
gtttcggaaactctacgcaagcactttgctgcttctaagaaactcaagccgcaaaagcag
agcaaactctatctgcaggaggtggaggaaatgctcctgcacctggtggagcgtaccaaa
gaggatgagcaaacagatctgctacagaagttgtgctcgaaggccactgacctggatctg
cgcacctttattcgcttggtgaagcacgacttaagaatcaatgcccgagcccggcacatc
ctggatgcttttggtcctgatgcctaccccgcatatcagtcttcccgcgatttggtggca
attgtcgaacagtttgccaccaaagaaaataaaaattatgctagtagtcccgttaagaag
actaagaaaacgagctcgagtgcaattcaggtaatgacacccatatcgcccatgttggcc
agtccctgcaagtcggtggaggacgccttcaagaagagccccactggactatatagcgag
atcaaatacgatggagagcgagttcaaatccacaagcagggcaacgacttcaagttcttt
agtcgcaatctaaagcctgtggtggatcacaagatacgggctctgaaaaaatatattccg
caagcctttcctggcggtggcgaaatgatactggactctgagatcattctggtcgacact
gacacaggagcactgctgccctttggttcgttgggtgcccataagaagcagactttcgcc
aatgctgctgtatgcttattcgtcttcgattgcatactgtatgatggcgaggatttgacc
cagctgccatttcgcaagcgtcgcgagattcttgagcagaatattcaacccattaaatcc
cacgtgcagctgtcggagtcggagttcctcaagaccacgagggaactggccgcgatgacg
gccagggtgttacatgccaatctggagggtgtggtcctaaagagtccaaccagcacatat
cagcccggcaaaaggaactggcttaaggtcaagaaggattacctattcgacggaaagatg
gctgacaccgcggacttggttgttttgggtgcttggtacggatcagggaagaaaggtggc
acgcttagtatttttctcatgggctgctacgatgcgtttgggcgtttgtggaagacagtg
accaaagtgcactctggcttggatgatgctaccaacgcagaggtacataaatcactaatc
aaactaaccgaacgtgctgatgccaacgcaattcccagttggctgttatgcagtaagtcc
cttgtaccagatgtactggccaaggatccgatgaaaatgccagtatgggagattactggc
gcagagttcaccaagtccgatgcccataccgcgtctggaatctcagtacgatttcccagg
attactcgtcgtcgcagtgataaatcagccaaagaggccaatgatctggcccatctagaa
gatcttttcgaggcctcaaaatcgaatgtaaatgttgatttacttctggccaattgtagt
aaagatgagacagcaatgaataacaaaacaactcctgaaaaggagaaaaaactgaatggc
aatcaatcaaatggtagtaagaaattgaaaaggtccaatactggttctgatgacgaagac
ggagctcctgtgctcagcaaacgcaaggagtccaaagcgattcgaagcttgtccccttcg
caaaagggattaaaggatttttttaagcccagcaaggagtttaaatcagttgtgaaaaag
gaaccaaaggaggatgaaggcaatattgaatccactagctcgaaaccccagttgttcgaa
ggattggtggcacactttgccatggagaaggattcaagtaaactgatgcagcagttttca
cagcatggaggatgctgtacaacagaaccacaaaaagctgatctggtcttttatgcgaat
acgaacgaggcattggacctagagaagcttagaacgctctatcgtcgtagctgccggcac
ttgaatgtaagctggctccaaagctgtctcgatactcagagtcgtcaaccttttccccta
cacgccgtgatgatgaaatga
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