Drosophila melanogaster (fruit fly): Dmel_CG32604
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Entry
Dmel_CG32604 CDS
T00030
Symbol
Prp16
Name
(RefSeq) pre-mRNA processing factor 16, isoform A
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmel_CG32604 (Prp16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dme03041
]
Dmel_CG32604 (Prp16)
Enzymes [BR:
dme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmel_CG32604 (Prp16)
Spliceosome [BR:
dme03041
]
Complex C
Other components
Step II factors
Dmel_CG32604 (Prp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Microtub_bd
nSTAND3
SLFN-g3_helicase
T2SSE
Flavi_DEAD
AAA_30
SRP54
cobW
ABC_tran
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
32373
NCBI-ProteinID:
NP_572947
FlyBase:
FBgn0026713
UniProt:
Q9VY54
LinkDB
All DBs
Position
X:14201362..14224732
Genome browser
AA seq
1222 aa
AA seq
DB search
MSDDDESGVHRLEGTAGQETRGGLVIRKPKDAGAGGGGGFKVPQGSMLGLDKLAAKRRAE
KERSERLISFKDSEFDDTGGGSSTPQANASGASSEFAFKKPDTKSFEKLRGQLREHKDDT
PSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDRDWDRDRRRDRDRDRDRDRDR
RQHRERERDRHRSWDRDRGRDRDRDRSMSERSVHTPREPGTPGGSSGGISNSSWDDEDGE
FGQRKSDWDMPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKRSG
ATPWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTK
RISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGRI
VFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMGV
QRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASR
QELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVS
DEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERS
LSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKN
TCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPI
YSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMD
ALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLL
KSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQM
LIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQW
RQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYF
YQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDG
YWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEMEERKQQAAEREEQLA
TKQEIATPGNATPRRTPARIGL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgacgagtcgggtgtccatcggctggagggcaccgctggccaggagacg
cgcggcggcctggtcatccggaagcccaaggatgccggcgctggcggtggcggtggattc
aaggtgccgcagggatcgatgttgggcctggacaagctggcggccaagcgacgggccgaa
aaggagcgatccgagcgactgatctccttcaaggacagcgaattcgatgacaccggcggc
gggagctccacgccgcaggccaacgcctctggcgcttccagtgagtttgccttcaagaaa
ccggacaccaagagcttcgaaaagctgcgcggccagctgcgcgagcacaaagacgataca
ccctcgcacaccggcggcgtttccgagaaggcacgcgagcgtctgcgcgagcacatccag
cgggacagaaaacgtggcccagtcagcagcacagcggcagagggcagggacagggatcgc
gactgggatcgtgaccgacgcagggaccgggacagagatcgggatcgtgaccgcgaccgg
cgccaacacagagaaagggagcgcgatcggcaccgcagctgggatcgggatcgtggtcgt
gatcgtgatcgtgatcgctccatgtccgagcgcagtgtccatacgccgcgtgagccggga
acaccaggcggcagcagcggtggcatatccaatagctcgtgggacgacgaggacggcgag
tttggacagcgcaagtcggactgggatatgccaacgcccagacgccatggcaacaagtcg
ggtgattggtcagtgcggagcggcggcagtcggcgtaatcacggacgccaggatgacact
gtccggccaacgccagcgcatcgctacaatcagtgggcacacggtcgcaagcgaagcggc
gcaacgccatggggcgaggatcccgaatcgctggatctgtgggaggaggagcagcgtcgc
ctcgaccgcgagtggtacaacattgacgagggctacgacgatgagaacaatccattcggt
ggccccaactccgagtactttcgcaagcgcgaagagcagctggagcagaagagaacaaag
agaatcagcgctcagcagcgccagaataaccgtgacaacgagttgtgggagcgcaatcgt
atgctcacctcgggcgtggtcacattgatcagcgtcaacgacgatttcgatgaggaggcg
ctggagcgagtgcatctcctggtgcatcacataataccgccatttctcgacggccgcatc
gtgttcaccaagcaaccggagccggtggtgcccgtcaaggatcccacctcggatatggca
ctgctggcgcgcaagggcagcgccctggtgcgcaactatcgcgagcaaaaggagcggcgc
aaggcgcaaaagaagcactgggagctgagcggcaccaagctgggcaacattatgggtgta
cagcggccgcaggacgaggacgatatgcgtttcgacaaggagaaggacaaggccgactat
cgcaaggatcagaagttcgccgaccatatgcgcgaccaggatacgggtggcaagagcgat
ttctcgcgcaaaaagaccatctcggagcagcgccgcttcctgcccgttttcgcatcgcgt
caagagttgctcaacgttattcgcgagaactcggtgatcattatcgtgggcgagacgggc
agcggcaagacgacacagctaacccagtatcttcacgaggatggctacagcaagcgtggc
atgatcggttgcacgcagccgcgtcgtgtggccgccatgtcggtggccaagcgagtctcc
gacgagatggacacccagctgggcgaggacgtgggctatgccatccgtttcgaggactgc
acgtcggagcgcacggtcatcaagtacatgacggatggtattctgctccgcgagagtctg
cgtgatccggaactagacagctactccgccatcattatggacgaggcccacgagcgatcc
ctttcgacggacgtgctctttggattgctgcgcgagattgtggcccggcgacatgacctg
aagctgatcgtgacctccgccacgatggactcgagcaagtttgccaccttcttcggcaac
gtgcccacgttcaccattccgggacgcacctttcccgtggacgtgatgttcagcaagaac
acctgcgaggattacgtggaatcggcggtgaagcaagcgttgcaggttcacctcacgccc
aacgagggcgacatgctcatcttcatgcccggccaggaggacatcgaggtgacgtgcgag
gtgctcgaggagcgactggcggagatcgataatgcgccggcactaagcatactgcccatc
tattcgcaattgccgtccgatttgcaagcaaagatctttcagaaatccagcgatggattg
cgcaagtgtgtggtggccacgaacatagcggaaacatcgctaaccgtcgacggcatcatc
tacgttatcgattccggctactgcaaactgaaggtctacaatccgcgcatcggcatggac
gccctgcagatctatcccatatcgcaggcgaatgccaatcagcgcagcggtcgtgccgga
cgcacaggacccggtcaggcgtaccgcttgtatacgcagcgccagtacaaggacgagctg
ttggccctaaccgtgcccgagattcagcggaccaatctggccaatacggtgctgttgctc
aagtcactgggcgtcgtcgatctgctgcaattccactttatggatccaccgccgcaggat
aacattcttaactcgctgtaccagttgtggatcctgggagcactggaccacactggtgcg
ctgaccacactgggtcgccagatggccgaattcccgttggatccgccccagtgccagatg
ctaatcgtggcctgccgcatgggctgcagtgccgaggtgctgatcatagtttccatgttg
tccgtgccatcgatcttctaccggccaaagggccgcgaggatgaggcggatggtgtgcgc
gaaaagttccaaaggcccgagtccgatcacctgacctacctcaacgtttatcagcagtgg
cgccagaacaattacagttcgacctggtgcaacgaacattttatccacatcaaggcgatg
cggaaggtgcgcgaggtgcggcagcagcttaaggacatcatgacgcaacagaatctgagc
gttataagctgcggcatcgactgggacattgtgaggaagtgcatctgctcggcatacttc
taccaggcggccaggctcaagggtatcggagagtatgtcaatctgcgaactggcatgcca
tgccacctgcatcccacgtccgcgctgtatggcttgggcaccacgcccgactatgtcgtc
tatcacgagctgatcatgaccgccaaggagtatatgcagtgcgccaccgctgtcgatggc
tactggctggcggaattgggtcccatgttcttttcggttaaggagtccggtcgcagcggg
cgcgagaagaagaaacaggcggccgagcatctcaaggagatggaggagcagatgctgaag
gcgcagcacgagatggaggagcgcaagcagcaggccgccgaacgggaggaacagctggcc
accaagcaggagatcgccacaccgggcaatgccacgccccgacgcacgccggccaggatt
ggcctttga
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integrated database retrieval system
