Dehalococcoides mccartyi GY50: GY50_1228
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Entry
GY50_1228 CDS
T02938
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dmg
Dehalococcoides mccartyi GY50
Pathway
dmg03030
DNA replication
dmg03410
Base excision repair
dmg03420
Nucleotide excision repair
dmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GY50_1228 (polA)
03410 Base excision repair
GY50_1228 (polA)
03420 Nucleotide excision repair
GY50_1228 (polA)
03440 Homologous recombination
GY50_1228 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmg03032
]
GY50_1228 (polA)
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_1228 (polA)
Enzymes [BR:
dmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GY50_1228 (polA)
DNA replication proteins [BR:
dmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GY50_1228 (polA)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GY50_1228 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GY50_1228 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
RecR_HhH
DNA_pol_lambd_f
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AHB13999
LinkDB
All DBs
Position
complement(1129469..1132180)
Genome browser
AA seq
903 aa
AA seq
DB search
MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DRKGPTFRHEMFKDYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEAAVRAKYGLGPEHI
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARDSKILTTIVRDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGRENQLQGTP
DMFAAAPKVETRYTVADSQNIDSIVKRLANAKELALAVSGTPEEAMDARLTALALSSAAG
DACFVPAEFIGSASEGQMFTTEGHSGLAALLGDEKICKTAHNAKYLMNLLLSAGQEVKGL
DFDTMIAAHLLGEKNLAIKDLVFEHFGIEIADIENILTRNGKKTIFSEVQLSEAAQLAAD
YTFRLKGIFAAQLAETKLMDLFARVEMPLLPILLGMERTGIMLDTDLLKAMAEKTGRQIF
KLEEDIYAQAGHSFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLEELKGKHRIVD
LILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPPGTVLLAGDYSQIDLRVLAHLSQDPALIEAFQSDQDIHTATAARLLNIS
PSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAVYFAEI
KQQARTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KLKEEKLKSRLLLQVHDELIFEVPTAELGRMSDLLVETMSGAVAFEIPLKVELKSGANWG
DME
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaatagtcctctttgacggtactaatctggtccaccgcgcgtatcat
gtacttcctccgcttgcaatccgcaaaacaggtgaagtagtgggtgccgcttttggtttc
gcctccatactgattaaagtcttaacagaccttaaaccggattgttacgccatatccttt
gacagaaaaggcccaaccttccgccatgaaatgttcaaagattacaaagcccagcgtccg
cctatgcctgacgaactggtcagccagctgggacgggtacgccagattgtagatgctttt
aatatgccggtatacgaacagagcggctttgaggctgatgatgtgctgggtacgctggca
accagagccgctgccgcaggtatggaggttattatagcctccggagacgcagattccatg
cagctggtcgggccggatatccgcattttgtatcccggtccggcaggttcttttgccagc
accagtttgtatgacgaggcggcggtaagggcaaaatacggtttggggccagagcatatt
gcagattacaaagcccttatgggtgacccgtctgacaatatccctggagtaccaggcata
ggcccgaaaaccgcccagaaacttatagaagagtacggcggcatagaagatatttataaa
aatctggataaaataagcccgcccggtcttcagaaaaagctggcagacaatgccgaagta
gcccgtgacagtaaaatactgacaactatcgtgcgtgatttgccgcttgatttcagtatt
gaggaatgccgggcagagcactataaccgccagaaagtggtagacctattccgcgagctg
gagtttttcaggctgattgaccgcctgccgggaagggaaaaccagcttcagggtacgccg
gatatgttcgctgccgctccaaaggttgaaacccgctatacggtggcagacagccaaaat
atagacagcatcgttaaacgcctggcaaatgccaaagagctggcgctggcggtttcgggt
actcccgaagaagctatggatgcccgcctgacggcactggcactttcaagtgcggcgggt
gatgcttgttttgtacctgctgagtttatcggcagtgcttcagaagggcagatgtttacc
actgaagggcattccggcttggcagctctgcttggtgatgaaaaaatatgtaaaaccgcc
cataacgccaagtaccttatgaatttgcttttatctgccgggcaagaagtaaaagggctg
gattttgataccatgattgccgcccatctgctgggtgaaaaaaatctggctatcaaagac
cttgtctttgagcatttcggcatagagattgcggatattgaaaatatactgacccgaaac
ggcaaaaaaaccattttcagcgaggttcagctttcagaagcagcccagcttgcggctgat
tacactttccgcctcaaaggtatctttgccgcccagcttgccgaaaccaagctgatggat
ttatttgccagggtggaaatgccccttttgcccattctgctgggtatggaacgcaccggc
attatgctggatacagatttgctgaaggctatggctgaaaagacaggcaggcagatattt
aaactggaagaagatatctatgcccaggcagggcatagctttaacataggctccccccag
cagctggggcggatactctttgacgaactgaaactgccggttatcaaaaagaccaaaacc
ggctattccaccggggcagaggtgcttgaagagctgaagggcaagcaccgtattgtagac
ctgatactggaataccgtatgctggtaaagctgaaatctacttatctggataccttgccg
cgtatggtaaacccgcatacccggcggctgcataccagtttcaaccagacccgtacagct
accggcaggttatcttcttccgagcctaatctgcaaaacatacctgtcaggggcgaaatg
ggcagggagatacggcgggcatttattgcacctccaggcacagtgctgctggcgggagat
tactcccagatagacctcagggtgctggcccatctttcccaggaccccgccctgatagag
gctttccagagtgaccaggatattcacaccgctactgccgccagattgctgaacatttcc
ccgtccaaagtgactaaagaacaacgccgcttagctaaaaccgtaaatttcggggtgata
tacggcatgagcagctacgggctggaacaggctaccgagctttcgctggaagaagctgac
aagtttataaaggcttattttgaaaaatatccgcgggtggctgtttactttgcggaaatt
aagcagcaggcacgtactcagggttatgtggaaaccctgctgggcagacgccgctatatt
ccggaaatcaattcacccaaccgtattctgcgtgaatcagccgagcgcatggctatcaat
atgccggtacagggaacatctgctgacattatcaagctggctatggtccggctggacgaa
aagcttaaagaagaaaagctgaaaagccgcctgctgcttcaggtgcatgatgagcttata
tttgaagtgcccacagcagagcttgggcggatgagtgatttgcttgtagaaaccatgtca
ggtgcagttgcctttgaaataccgctcaaggttgagcttaagtccggggctaactgggga
gatatggagtaa
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