Daphnia magna (water flea): 116916531
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Entry
116916531 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116916531
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116916531
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116916531
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116916531
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116916531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
USP7_C2
Motif
Other DBs
NCBI-GeneID:
116916531
NCBI-ProteinID:
XP_032777674
LinkDB
All DBs
Position
LG2:complement(16475169..16481182)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVCKMVPGDNTPAVKDSESMIFSGNPSATSSSGQHGEIRMALIVVQDMTTATLQIGHTSL
SLASTASVRTLVQQVATSTNYMNGTFSLLLQSTNSESSSVLLNERLHETLEAVGFVCDNG
HTRNNLIIANTGSEPPKKESPVKPEFSTFCSKRTMDRTTDSNTTLSNRTCSKRITDSSPD
GDVKPTDRISDVLSSRRRGFVGLVNQAMTCYLNSLIQTLFMTPEFRNAMYRWHFDGTEEE
QAKSIPFQLQSLFLMLQTTDKSSIGTTNLTRSFGWDSSEAWQQHDIQELCRVMFDALEHK
FKNTEQSDLISRLYEGKMMDYVRCLECRTDKAREDTFLDIPLPVRPFGSQTAYASIEEAL
KAFVAPETLDGNNQYWCEKCGKKCDAHKGLKFSRFPYLLTLHLKRFDFDYTTLHRIKLND
KVTFPEFLHLDSLLVDDRNGDPNASNKDSQDTAIEDSMSEASGSSRANSSNGIESQDDDE
GIDVRTEGCTSSTSCASGASSGDQNRKNRRQGQYNYELFSIMIHSGSASGGHYYAYIKDF
LTREWHCFNDQTVSSITYDDIRKTYGGGPSRSAGYFTSAYTSSTNAYMLMYRRIDKERNV
NFMSPSEFPEHLQQLLLRMQEEEKSQRAVEEQERNTCRIQLYCHHPKRGRIDLPLKLHKE
ITLRQAVSIAYEQIGDLSDIGVPLSRCRLVKYNELYDNVECSWDNRMEETVDDIFDGVRS
SYKFDLLLEIVPEGQTFQIYAPGSLNAKVFMVDVDAKEQLYLPVSIRMPFSSTVQDLKLS
IKSTMNIAEDPDHIHLVTISYSNELRRLTQKDRSLRSEGFQRAEKVYATVFPSSDESEFL
SSCKPRLYDLIDQYENALTVRMTLPKADKETLDRLGIDIVLPVIPTASNSPNAVRTASPM
ESYSPEDAASDDSLSHLERERALSEGEEEEEENRRRRLGDIEDFAVNSANSQECYSEGEE
LPQRLPNSTSSASASEDSSLSLTNSERTLLGDPPEVGEEDCDVEIGLASRRRNALVQAGP
ESVDSVPELEPVKYFFKVISSREDADERICTAMVDKRIPLASFKSELEVLLNVPAEFLLL
YKKTPTTASTFGTTEREWAQQNETLETLGDDPQIAVRLGRALRPGEVRGKIYQLKINDTQ
ERTQLLFEWVLSSGIQIGKMKRDILVELKSRHGVEIPPEKCVLRKKHWRTPSTVYGDENE
VLDTELLYIFKNWEMFLQVLDVNDPYDVASKYRGAETVIFTRRWRPSTFTLEPFVDTPLA
EFNRIVLGXKFFEMSGLKPDQIEIAKAPGTFPCEGSLLGIHDDITWVPLLTTGFDDDGSF
KYPCSVQTDGDVVYWREKGELLKKLTEQERREILSRENTDASVSGTSYPSVSASPRKERP
LRIFIDSPKSTSVKETVEPDLD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcaaaatggttccaggtgataacactcctgctgtcaaagattcggaaagcatg
atttttagtggcaatccgagtgcaacttcgtctagtggtcaacatggagagatacggatg
gctttaatagttgttcaggatatgacgacagctactctgcaaattggccatacaagcctt
tcgttggcctccactgcgtcagtaagaacactggtgcagcaggtcgccacatcaacaaac
tacatgaatggcacgttctctttacttttacagtcaacaaattcggaatctagttctgta
ctgttgaatgaacgtcttcatgagacgctcgaggctgtcggctttgtatgtgataatggg
catacaagaaacaatcttatcatcgctaacactggttctgaacctcctaaaaaggaatca
cccgtcaaaccagaattttcgacattttgttcgaaacgaaccatggatcgtaccacagat
tcaaatacaacattgtcgaatagaacatgctccaaaagaatcacagattcttctccagat
ggcgatgtcaaaccgacagatagaattagcgacgtgctttcttcccgccgaagaggattc
gttgggttggtgaatcaggcaatgacgtgttacctcaatagcttaattcaaaccttgttc
atgacacccgagttccgtaatgccatgtacaggtggcattttgacggtacggaagaggaa
caggccaagtcaattccctttcaattgcaaagtctcttcctcatgcttcaaacgacggac
aaatcttcaattgggactacaaatttgacacgcagttttggttgggattcaagtgaagct
tggcaacaacatgacatccaggagctctgccgagtcatgtttgacgcgctcgaacataaa
tttaaaaatacggagcaatcagatctgatctctcgactatatgagggaaagatgatggat
tacgttcgctgcttggaatgccgaacagataaagcacgcgaagacactttcctcgatatc
ccgctcccagttcgtccctttgggtctcagacggcatacgcctcaattgaagaggcctta
aaggcatttgtggcaccggaaacgctggacggcaataaccagtattggtgcgaaaaatgt
gggaagaagtgtgacgcccacaagggtctcaagttttcacgtttcccctacttactaact
ttacacctcaagcgattcgattttgattatacaacacttcatcgcataaaattgaatgac
aaggtcaccttcccagaattcctacatttagactcgcttctcgttgatgatcgaaatggt
gatccaaatgcttctaataaagactcccaagatacggctattgaagactcaatgtctgaa
gctagcgggtcgtcgcgtgcaaattcgagtaacggaattgaatctcaagatgatgatgaa
ggcatcgatgtaaggacagaaggatgtacttcgagcacgtcctgtgcttcaggtgctagt
agtggcgatcaaaatcgcaagaaccgtagacaaggccaatacaattatgaactattctct
atcatgatccattccggtagtgcatccggtggccattactacgcttatattaaagatttt
cttacacgtgaatggcattgtttcaacgaccagacagtgtctagcattacgtacgatgat
attaggaagacttacggaggaggaccttcgcgaagtgccggttattttaccagtgcctat
acctctagtaccaacgcctatatgcttatgtacagacggattgataaagaacgtaacgtg
aatttcatgtccccgagtgaatttcccgagcaccttcaacaacttctcctacgaatgcaa
gaagaagaaaaaagccaacgggctgtcgaagaacaggaaaggaacacttgccgcatccag
ttatattgccatcatccaaaacgtggtcgcattgacttgccattaaaacttcacaaagaa
attaccctgcgccaagctgtttcaatcgcatatgaacagattggcgatctgtccgatatt
ggcgtcccattgagccgctgccggctagtcaagtataatgaactttacgacaatgtagag
tgcagctgggataatcgaatggaggaaacagtcgacgatatctttgacggagttcgttct
tcctacaagtttgacttgctcctagaaattgtgccagaaggtcaaacttttcaaatttat
gctcctggaagtcttaatgctaaggtctttatggtggatgtggatgcaaaagaacaactt
tacctgccagtttccattcgtatgcctttcagcagtacggttcaagatcttaagctcagc
attaaatctacaatgaacattgccgaggatcccgatcacatccatctagtaaccataagt
tattctaacgaattacgtagattgacgcaaaaagaccgtagtttaaggagcgaaggcttc
cagagagcggagaaggtatacgctaccgtatttccctccagcgatgagagcgaattctta
tcgtcctgcaagcctcgcctgtatgaccttatcgatcaatatgaaaatgccctgactgtt
cgtatgacgctacccaaagccgataaagagacactagatcgcttgggtatcgatattgtt
cttcctgtaatccccacggcttccaattctccaaacgcagtcagaacagcttctccaatg
gagtcgtacagtcccgaggatgctgcctcggacgactccctatcccacctggagcgtgaa
cgcgccttgtccgagggcgaggaagaagaagaagaaaatcgtcgacgtcgtctaggagac
attgaagactttgccgtcaactccgccaactcccaagaatgctattcagaaggcgaagaa
cttcctcagcgtcttcccaattctacctcatctgcctcagccagtgaagacagcagtttg
agcttgactaatagtgaacgtaccctattaggtgatcctcctgaggtaggagaagaggac
tgtgatgttgagatcggtctcgcctcccgaagaaggaacgctttagttcaagcgggacct
gaatctgttgattccgtaccggagctggagcctgtcaaatattttttcaaggtgatttca
agcagggaagatgcagacgagagaatatgtacagccatggttgacaaacgaattcccttg
gcaagtttcaaatctgaactagaggtgctcctcaacgttcctgccgagtttcttttactg
tacaagaagacccccaccacggcatcgactttcggtacaaccgaacgtgaatgggctcaa
caaaacgagacgctggaaaccctaggagacgacccacaaatagctgttcgacttggcagg
gcacttagaccaggcgaagtccgcggaaagatttatcagctgaaaatcaatgatactcaa
gagcggacacagttattgtttgaatgggtgttgtcatctggtattcaaatcggaaaaatg
aaacgagacattttggtcgaattgaagagtcgtcacggtgttgaaatccctcctgagaaa
tgtgttttgcgcaagaagcactggcgcacaccttcgactgtctatggagacgaaaacgaa
gtactggatacggaattgctgtacattttcaaaaactgggaaatgtttttacaagtactg
gatgtgaatgacccctatgacgttgcgtccaaatatcgaggagccgaaactgtcattttc
acccgtcggtggcgaccgagtacgtttacgctggaaccgtttgttgacacacctctggct
gaatttaatcgtattgtactgggcnaaaaatttttcgaaatgagcggtttaaaacctgac
cagatcgagatagctaaggcacctgggacgttcccatgtgaagggtcccttctaggaatc
catgacgatattacatgggtgccgttgctgacgactggttttgacgatgacggctccttc
aaatacccttgctctgtgcagacggacggggacgtggtctattggcgtgaaaaaggcgaa
ctgctcaagaaactgacggaacaggagcgcagagagattcttagccgagagaataccgat
gcaagcgtctccggaacttcctatccatctgtatccgcttcacctcgcaaggaacgcccg
ctaagaatctttatagactcgcctaaatccaccagcgtaaaagaaactgttgaacccgac
ttggattga
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