Daphnia magna (water flea): 116917230
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Entry
116917230 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116917230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116917230
04147 Exosome [BR:
dmk04147
]
116917230
04090 CD molecules [BR:
dmk04090
]
116917230
Enzymes [BR:
dmk01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116917230
Transporters [BR:
dmk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116917230
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116917230
CD molecules [BR:
dmk04090
]
Proteins
116917230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_16
AAA
AAA_5
Rad17
AAA_29
AAA_18
AAA_15
AAA_7
AAA_28
PhoR
Motif
Other DBs
NCBI-GeneID:
116917230
NCBI-ProteinID:
XP_032778551
LinkDB
All DBs
Position
LG1:1721787..1727975
Genome browser
AA seq
1362 aa
AA seq
DB search
MAPKLDLDDLKGQLNEAYIADDDFAKKKEEDTSSSSISSIPDNKEDGKKKKEKPPPPENP
PVPFFDLFRYASPTDFVLLVFGTLGAIGTGICFPIMLILFGDITNAFVGGGLDQETINEI
NCNISNDPNYTYPYPLGPTCNLSDPTNSYANSPEGQAIQDEFTKFGIYVAVIGAALFVLG
FNFITALNFTAENQVYRIRSRFLQAVLRQDVGWFDTKSSNDFASRITEDLNKIQDGIGEK
IGMFTFSMXSFIASIINAFIHGWQLTLVMLVSTPVLAISMGILAKVQASLTENELKAYAE
AGGVAEEVFSSIRTVMAFGGQSKEIDRFQKNLAFAKKAGIKRGMATGIGAGLVWGIIYAS
YALAFWYGISLILAACDGNSYSSSDLLIVFFSVLIGAMQIGQAAPYIEAFSVARGAAATI
FSIIDRIPPIDSFSDKGLVPDGVDGKIAFRNVHFNYPSRPDVKILQGISFDVIPGQTVAL
VGTSGCGKSTCVQLLQRFYDPIEGSVSIDGNELRDLHLGWLREQMGVVGQEPVLFGTSIG
ENICYGRDGVSQEEMERAAKEANAHDFIQRLPRKYDTLVGERGAQLSGGQKQRIAIARAL
VRQPKILLLDEATSALDTQSESVVQKALDKARQGRTTIIVAHRLTTIRNADRIIVIKDGV
IQEDGTHDKLMAKRGIYYQLVVSQQGGEQDSKRSSFDDNSESEDDEVNTAKAKSWIPDEK
EEAMDAISLAGSHPLGRNNSIRSARLSVASSAVSAQSEDIDVSLMEIMRMNRKEWPYITL
GVIGSAIVGLSTPVYAILFSEVLGVLTPGGSAEEQAYKRERGNFYSLMFLILGIVAGFAA
FAQSFSFSVAGESLTSRLRGLTFEAILKQEVGWFDRKTNSVGALCARLSGDAASVQGATG
SRIGVLFQALTTMVASVILALYFQWKLGLVALCFVPLLLISTYFQAKIIMGQSALERDGL
QKSAKVAMEAIANIRTVASLGKERQFHTIYMDSLREPHRQALKKSWVRGAIFGFASAIPM
FAYSVTMYYGGWLIVNECLDFTSVFKVSESLLFGTQMIGQAVAFAPNYNKAKVAANRIFA
LLKRIPLIDASSPGGSIIQNVEGNVDFDQVRFRYPTRKDAEVLQGLTMAVRAGQTVALVG
HSGCGKSTCIQLLERFYDPDSGQVQLDGKDINPINISSLRSQMGIVSQEPILFNLTIGQN
IAYGDNSRVIPMDEIIEAARKANIHTFIQSLPNGYETMVGERGTQLSGGQKQRVAIARAL
IRNPKILLLDEATSALDSESEHVVQMALDAAREGRTCITIAHRLSTIQNADNIIVINQGT
IKEQGTHEELIQLGGLYFELCSVQGIVLKPVSSSANMEEIAF
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaaattggatctcgacgatttaaaaggtcaactcaatgaggcttacatcgct
gacgatgattttgcaaaaaagaaagaagaagacacgtctagcagctcaatttccagcatt
cctgacaataaagaagatggcaagaaaaagaaagaaaaaccaccaccgcctgaaaatcca
cctgtcccttttttcgacttgttccgttacgcttcgcctaccgattttgtgctgttagtc
tttggcactttaggggccatcggtacgggtatttgtttccccattatgttgattctcttt
ggggatatcacaaatgctttcgtcggcggaggtttagaccaggaaacgattaatgaaatc
aactgcaacatttccaacgatcccaactacacttatccgtaccctctaggtccgacgtgc
aatctttctgatccaaccaattcatacgcaaattcgccggagggacaagcgattcaagac
gaattcaccaagttcgggatctacgtggcagttatcggagccgcactttttgtgctaggc
ttcaattttattacggcgcttaattttacggccgagaatcaggtctatcggattaggagt
aggttcttacaggctgtccttcgccaggatgttggctggtttgacaccaaatcatcgaat
gattttgctagtcgcattacagaagatttaaacaagatccaagatggcataggagagaag
attggcatgttcacattttccatgncgagtttcatcgcatcaattattaacgcattcatc
cacggatggcaattgactttggtcatgttagtttccacaccagtcctggctatttctatg
ggtattttagccaaagtccaggcatctttgacagaaaatgaactaaaagcttatgccgaa
gcgggtggtgtggcagaagaggttttcagttccattcggacagtcatggcatttggcgga
caaagcaaagaaattgatcgttttcaaaaaaatttagcattcgcaaaaaaggccggcatc
aaacgtggcatggcaacagggatcggtgctggccttgtttggggaattatctacgctagt
tatgctcttgccttctggtacggcatttcgcttatcctggcggcttgcgatggaaactct
tattcttcttccgatctgctcatcgttttcttcagcgttctcattggtgccatgcaaatt
ggacaagcagctccttacatagaagccttttcagtcgccaggggcgccgcagccaccatc
tttagcattattgatcgaattccgcctatcgatagcttttccgataagggattagttcca
gacggggttgatggcaaaatagctttccgaaacgtccatttcaattatccatcacgtccc
gatgtcaagattcttcaaggtatcagtttcgatgtcattcccggacaaactgtcgctttg
gtaggcacttccggatgtggtaaatccacttgcgttcaacttcttcaaagattctacgac
ccaatcgaaggatcagtgagtatcgatggcaatgaattgagggatctacacttgggttgg
ctgagagagcaaatgggtgtggtcggccaggagcccgttctctttggaacatcaatcggc
gaaaacatttgctacggccgagatggcgtttcgcaagaagagatggaacgcgcagccaaa
gaggctaacgcccatgattttatccaaagactacctcgcaaatacgacacactcgtagga
gagcgaggagcgcaattaagtggtggccagaaacagcgtatcgctattgcccgtgctctc
gtccgtcaacccaaaatccttctgctggacgaagccacttccgcactggatacgcagagt
gaatcagtcgtgcaaaaagctttagataaggccaggcaaggacgtaccaccatcatcgtt
gctcacaggctcacaaccattcgcaatgccgatcgcattatcgttatcaaagatggcgtt
attcaggaagatgggacgcacgataaacttatggccaaacgtggaatctattaccaacta
gttgtatctcagcagggtggcgaacaagacagcaaaagaagctctttcgatgacaattca
gaatcagaagatgacgaagtgaataccgcaaaagctaaatcttggattccggacgaaaag
gaagaagccatggacgcaatcagtttggccggaagccatccactcggaagaaataactct
attcgaagtgcccgactatctgttgccagttcagcagtgtccgctcaatcagaagacatt
gacgttagtttgatggaaattatgaggatgaacaggaaagaatggccttacatcacttta
ggcgtcatcgggtcagcaattgttggcctcagcacaccagtttacgcaatcctcttcagc
gaagttcttggagtcttaacacccggtggatctgccgaagaacaagcatacaaaagagaa
cgaggcaacttttactcgctcatgttcttgattcttggcatcgttgccggattcgcagct
tttgcccagtctttctcattcagcgttgccggagaatccttgacatccaggctgcgcgga
ttaactttcgaagccattttgaagcaggaagttggttggttcgatcggaaaacgaacagt
gtcggagcactttgcgcccgcttgtctggtgatgctgccagcgtccagggcgccactggg
tctcgaattggtgtactgttccaggcgcttaccaccatggtcgcctcggttattctggct
ctctatttccaatggaaacttggattggttgccttatgtttcgttccacttcttctcatt
tcaacctacttccaagccaaaatcatcatgggtcaatccgctctggaacgcgatggacta
caaaaatccgccaaagtggcaatggaagcgattgccaatattcgcactgtagcaagtctt
ggaaaggaaagacaattccacaccatctacatggattctttacgagaacctcatcgacaa
gctcttaaaaagtcctgggtccgtggggcgatttttggattcgctagcgccataccaatg
ttcgcttattccgtaacgatgtattacggaggatggcttatcgtcaacgaatgcctcgat
tttaccagcgtcttcaaggtcagcgaatctcttctgtttggaacacaaatgattgggcag
gcagttgcattcgctcccaattataacaaagccaaagtagctgccaacaggatatttgct
ctactaaaacgcattccacttatcgatgcctcttctcccggcggttccatcattcaaaac
gttgaaggcaatgtcgatttcgaccaggtacgtttccgatatccaacgcgtaaagatgct
gaagttcttcaaggattgactatggccgtgcgagctggccagacggtcgcccttgtgggc
cacagtggttgcggaaagtcgacttgcattcaattactggaacgcttttacgatccagat
agcggtcaagtacaattggatggcaaagatattaatccaatcaacatatcctcgttgcgt
tcacaaatgggcatcgtatcccaggagcctatcctcttcaacttgactattggtcaaaac
attgcctatggtgacaatagccgcgtcattccaatggatgaaatcatagaagccgcaaga
aaagccaacattcatacatttatccaatctttgccaaacggctacgaaacgatggtcggt
gaacgaggaacacagctttctggtggacagaaacaacgtgtggccattgctagagcattg
ataagaaatccaaaaatcctgctgctggacgaagcaacttcggcgttggattccgagagt
gaacatgtcgtccagatggctttggacgccgctagagagggccgtacatgcatcacaatc
gcacatcggctgagcacaattcaaaatgcagataacatcattgtgattaatcaagggacg
ataaaagagcaagggacacatgaagaactcattcagctagggggtctttactttgagctt
tgttctgtccagggcattgtattgaaacctgttagctcgtcagcgaatatggaagaaata
gccttttag
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