Daphnia magna (water flea): 116919373
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Entry
116919373 CDS
T07514
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase calypso
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116919373
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116919373
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116919373
03036 Chromosome and associated proteins [BR:
dmk03036
]
116919373
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116919373
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
116919373
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
116919373
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116919373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
116919373
NCBI-ProteinID:
XP_032781230
LinkDB
All DBs
Position
LG6:complement(5619195..5621938)
Genome browser
AA seq
525 aa
AA seq
DB search
MPIDINDLSEGWLELESDPGIFTLLLEDLGACGVQVEEVYDLQKPLDGDAPVYGYIFLFR
WRERSRRKTILDAEQFIKDEAAINNMFFAHQVVPNSCATHALLSILLNCPQVTLGPTLSR
LKLDTSGMSPDNKGLAIGNTPELALAHNSHAAPAVACDRNERNANVPSSGRFSAEAFHFV
SYVPVDGQLFELDGLKPFPIDHGPWAANEDWTELFRRVIQERIGSATAGGEPYHDIRFSL
MAVVPDKRLAVRQRLNLLKTNRKIVLDALRQLTLLSGGPRETGRKTPSDKASAEEYRNTE
METENPSFETLTIQTSPNLISNYSTDTASESGSAFNSPNLTQPQPTSTDLANSTFVKDFS
RLVVVKMSAQSADLVGGVVASKTENHLLKANDDSQPLADFISPRSGMVEMETNVIGERRN
QQQRFGPCDLMALLKSLEKEIDTYEVLLAEEIEKRKKYRVDDCRRTHNYDEFICTFLSML
AERGTLASLVEQHTTRRKRSHRSSPGTESPNGRHKKGRSRNKRRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagatattaatgacttgtcagaaggctggcttgaacttgagagtgatccaggt
attttcaccttgttactggaagatttgggtgcctgtggagtacaagtagaagaagtatat
gatttacagaaaccccttgatggggatgcccctgtttatggctatatttttttgtttcgt
tggagagaacgatccagaagaaaaaccattttggatgctgagcagttcatcaaagatgaa
gcagccattaataacatgttttttgcccatcaggtggtaccaaatagctgtgctacacat
gcactgctctcgatccttttgaattgcccacaggttactctgggtcccacactatctaga
ctgaaactagatacttctggtatgagtcctgataataagggtttggccattggtaacaca
cctgagctggcattggcacacaattcgcatgcggctccggcggttgcttgcgacagaaac
gagcgtaatgctaacgtcccttcttctggtcgatttagtgccgaagcgtttcactttgtt
agctatgtacccgtcgacggccaactttttgagttagatggcttaaaaccttttccaatt
gatcatggaccctgggctgcaaacgaagactggacagagctatttaggcgtgtaatacaa
gaacgaatcgggtcagcaaccgcaggaggagagccctatcatgatattcggttcagcctc
atggctgtcgttccggataaacgattggcggtccgccaaagattaaatctgttaaaaaca
aaccgaaaaattgttttagatgctctacggcaattgacgttgctctctggtggtcccaga
gaaactgggaggaagacaccaagtgataaggcttccgccgaagaatacagaaatactgaa
atggaaaccgagaatccttcgttcgaaacgctgacaattcaaacatctccgaatttaatt
agcaattacagcacagacactgcatcagaatcaggatcagcttttaactctcctaatctg
actcaaccacaaccaacgagtaccgatctagcaaacagcacttttgtcaaggatttcagt
cggcttgtcgtcgttaaaatgagcgcccaatcagccgatttggtgggaggcgtggtcgcc
agcaaaaccgaaaatcatttattgaaagcaaatgacgattctcaaccattagcagatttt
atcagccctagaagtggaatggtagagatggaaacgaatgttattggagaacggcgaaac
caacaacagcgttttggaccatgtgatttaatggctctgctcaaaagtttggaaaaagaa
attgatacatatgaagttcttcttgccgaagagatagaaaaacgaaaaaaataccgggtt
gatgattgtcgccgtacccataattatgacgaattcatttgcacatttctctccatgtta
gcagagagaggaacgctggcttcacttgtcgagcagcatacaactagaagaaagcgatcg
cacaggagtagccctggtacggaatcacctaatgggcgccataagaaaggccgttctcga
aacaaacgccgccgataa
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