Daphnia magna (water flea): 116919985
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Entry
116919985 CDS
T07514
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116919985
Membrane trafficking [BR:
dmk04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116919985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
116919985
NCBI-ProteinID:
XP_032781916
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Position
LG4:11356051..11361961
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AA seq
1403 aa
AA seq
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MMMPINTVGGPSAVEVIQQSFNPAIAVLTSPDVDVVCSKNRLTFVELLQPFSRLSVEGQI
RDVNQALHSVTHFRLSVRDISWRPASSVLARRLLAEAVTNFPVNENKIAVIGGADPIEIN
PHTPWYDSWRETLWSCLEMTDHDFARHYLGTLLVVSSSHPNPMEQFQQLNDQLTQLMSSN
GTADGPRWFNMLSLRYQVLVHDACDGDASNFRAEELLQTMRNVYGSHGCHLLVINSKPKK
GSIIESGLPAPDPWLRFLPRKANKRTIWKKLDVSIEGESIVDGVEAGEMDFPVKVVEGTN
PQLLGSLPKIPLMDALQEAMQEININSVLAPSASTSALSSLTRDDNISTQNNIGLSQRSA
VEIKDDPLNAVLGTTTARFPLDEADGTGPILASSITSELHGGCLTTEDLDRIQGLVNEFC
LKSLLPHMERQMRLLNESASSRKSTHRSLLSATKRWFGSNRPGGVQTPQTVAVSYHPESV
QLQLRRLGDLAFLLGHYELAYHSYHSAKKDFEADQAWLHYAGAMEMAALSVFLQNANSRN
VPFHYFDKALTTYLQTCKMPYWATRCAVLASECLKATNQYSDAALQLIRLTSEDADLRSA
ILLEQAALCFLRSAVKPNSSTDAAKPNMVPLIRKYAFHMILAGHRFGKSGQKRHASRAYQ
LALQVYKGHGWSLAEDHIHYTVGRQCLNRQQIEAACQALAALLKPDSMQTAAQQTAYLNE
FIHVHQRKQLLNKHRENETKTSCTLPILPLPVIDSNQIRVLVDTKEPTENMSPPLSEATH
VTFNDDEVHHAKWANMEEKLVNSAFGTTHAIFRPTNLIFSHTTNNTVHPQMNCDDLVSFE
LPLTNPLRIPVQLCDIRLVWNFAGGDGNLTNLLTTIENPLVTTYILPRIVLNPSSSHKII
LNVKPKAEGILTIEGLAFDLRPVNVEPSAAVVGLMSSVSGRVMFSLRGPRLNTTQQERHG
KVYATDKRLSIQVGPRMPKLQVLFHSLPEFMFSGEIRPVTVELSNLCPNVPISNIIVASN
DPLHVAFDLPRIESINIRHDQVALYRWDSSQKSTIMWLKGTENVGLTSLDLMFFSTNPAV
KARRYRLLRHCSKIFVSSSLNLAAWVQRVPSRDDRTETLAVQLQVRNLRDADDTSLSGIE
ISQVAFLSNRWLLRPLQSTIPSGVLHPQESLIGVLLAIRGKENIEYCESATLKLPSHGRA
VDFKQEPYRAFVREFQRTTPNTTLVVCWTATQASEDGFGTLIIEGQHYFGWNSHDIANSS
LPDTNFKLSQQLVTYSMEYSTKVFHDFNKQRLCVIPVILYLHNCSQQEIDVHYSANFNTG
KTSRVSQLYMPEAASPLLWIGRVQGNIYVRDAPEAVNLAIAVSRPGAYSLVQGLHIDGRI
LDENVRVPSPKIEYTLVVYDKEV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgccgatcaacacagttgggggccctagtgctgtagaagtaattcaacaatcg
ttcaatcccgcaatagctgttctaacatcacctgatgtcgatgttgtttgcagcaaaaac
agacttactttcgtcgaacttctacaaccgttcagccgactatctgtcgaaggccaaata
cgagatgtgaatcaggctttgcactctgttacacacttcaggctgagtgtcagagatatt
tcatggagacctgcctcttcagttttggcgagacgtttacttgcagaagctgttaccaat
tttccagttaatgaaaacaagattgctgttattggaggtgcagatcctattgaaatcaac
cctcatacaccatggtatgattcatggagagaaactctttggagttgtttggaaatgact
gatcatgattttgcacgtcactacttgggaaccttattagttgtttcatcttcccatcct
aatcctatggaacaatttcagcaacttaatgaccagctgacacagttgatgtcaagcaat
ggaactgctgatggacctaggtggttcaatatgttgtctttgcgttatcaagttcttgtc
cacgatgcgtgtgatggcgatgcttctaattttagagcagaagaattgttgcaaactatg
agaaatgtttatggatcccatggctgccatttgttagtaattaactcgaaaccaaagaaa
ggatcaataatagaatcaggactaccagcacccgacccttggcttcgatttcttccaaga
aaagccaacaagcgtaccatttggaaaaagttggacgtttctattgagggagaatcgatc
gtagatggagtagaggcgggagaaatggattttccagtgaaagtcgttgaaggaacaaat
ccacagttgctgggttccctgcccaaaataccactaatggatgcactgcaggaagccatg
caagaaatcaacataaattccgttttagctccttcggcttcaacttcggccctctcttcg
ctgactcgagatgataacataagtacccaaaacaacatagggttgagccagagaagtgcc
gtcgagatcaaagatgatcctctcaatgccgtattggggactacgaccgctcgctttcct
ttggatgaagcagatggaaccgggcccattctcgcttcaagcattacaagtgagcttcat
ggaggatgtctaacaacggaagacttagaccgtattcagggtttagtcaacgagttttgc
ttaaagagtcttcttcctcacatggaaaggcagatgagactacttaacgaatctgcctca
tcgcggaaaagtactcatcgatcgttgctaagtgccacaaaacgctggttcggtagtaat
cgacccggtggtgttcagacacctcaaactgtagctgttagctaccatcctgaatcagtt
cagctgcagcttcgtcgcttgggtgacttggcgtttctcctaggccactatgagctggcc
taccattcgtaccattcagccaaaaaggattttgaagcggatcaagcttggcttcattat
gctggcgcaatggagatggctgctctctccgtcttcctgcaaaatgccaatagtcgaaac
gttccatttcactattttgataaagcgctgaccacctatcttcagacttgcaaaatgccg
tattgggctacacgttgtgcagtgttggcttccgagtgccttaaagctactaatcagtat
agtgacgctgcgctgcaactcattcgactgaccagtgaagacgctgacttacgaagtgcc
atattgctcgaacaggctgccctttgtttccttcgatctgccgtcaaacccaactcctca
acggatgcagcaaagcctaacatggtaccactcattcgtaaatacgccttccatatgatc
cttgctggtcaccgtttcggcaaatcagggcagaagcgccacgcttctcgtgcataccag
cttgccttgcaagtgtataaagggcatggatggagcctagctgaagatcacatacactac
acagtaggacgccagtgtctaaataggcaacaaattgaagcggcttgtcaggcattggct
gctcttttgaaaccagattcaatgcagactgccgcccaacaaacggcctatctcaatgaa
ttcatccacgtgcatcagcgaaaacagttgctaaataaacaccgagagaacgaaaccaaa
acgtcgtgtactcttcccatattgcctctgcctgtgatcgatagcaaccagatcagagta
ctagttgacacaaaagaacctacggagaatatgtcaccacctttgtcggaagctacgcac
gtcaccttcaacgacgacgaagttcatcatgcaaagtgggcgaatatggaggagaaactg
gtgaattcggcatttggcacaactcacgctatcttccgacctaccaatcttattttttct
catacgaccaacaatacggttcatccacaaatgaattgtgatgacctcgttagttttgaa
ctaccactgaccaaccccttacgcattcccgtccagttgtgcgacattcgtcttgtgtgg
aatttcgcgggaggtgacggcaacctaacaaatctactcacgacgatcgagaatcccttg
gtgaccacttacatcttaccgaggattgtgctgaatccttcttcttcccataagataatc
ttgaacgtcaaacccaaagctgagggaatattgaccattgaagggttagcctttgatctt
cgccctgtgaatgttgaaccgtccgcagcagtagttggattaatgtcatccgtgtcagga
cgagtgatgtttagcttaagaggaccaaggttgaatacgactcaacaagagcgtcacggc
aaagtgtatgctaccgacaaacgactttcaatacaagtcgggccccgtatgcctaagttg
caagtgctattccactcgctaccggaatttatgttcagcggtgaaatcagacctgtcacg
gttgaactttccaatctttgccctaacgtacccatttccaacattattgttgcttctaat
gatcctttgcacgtcgctttcgacctaccacgcatcgaaagcatcaatattcgccacgat
caagttgcgctataccgttgggattcctctcaaaagtcaactataatgtggctaaaaggg
accgaaaacgttggattgacatcattggatctcatgtttttctccactaatccagccgta
aaagccagaagataccgcctccttcgccattgttcaaaaatcttcgtctcctcgtcctta
aacctcgctgcatgggttcaaagagttcctagtcgggacgatcgcacagagaccttagct
gtgcagctgcaagtccggaatcttagagatgcggatgacacatctctcagtggaattgag
atttctcaggtggcttttcttagcaatcgctggctgttacgtcctctgcagtcaacaatt
ccgagtggtgtccttcatcctcaggaaagcctcattggtgtactgttggcgattcgtgga
aaggaaaatatagagtattgtgaaagcgctacactaaaactaccaagccatggacgagct
gtcgattttaaacaggaaccttacagagcatttgtcagagaatttcagaggactacgcca
aatacaactttggttgtctgctggacggctacacaggcttctgaagatggatttggtact
ttaatcatagaaggccaacattactttggatggaactcacatgatatagccaactcaagt
ttaccagacaccaactttaagctatcacagcagttagttacatactcaatggaatattca
acaaaagtgtttcatgatttcaacaagcaaaggttgtgtgtaataccagtcattctttat
cttcacaattgcagtcagcaagaaattgatgttcattattcagccaatttcaatacaggg
aaaacttcacgtgtttctcaattgtacatgcctgaagcagcttccccattattgtggata
ggtcgtgtccaagggaatatttatgtgagagatgcacctgaagcagttaacttggctata
gcagtttcaagacctggtgcctatagtctagttcaagggttacatatagatggaagaata
ttggatgaaaatgttagagttccaagcccaaaaattgagtatacattggttgtttatgac
aaggaggtttaa
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