Desulfonema magnum: dnm_065670
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Entry
dnm_065670 CDS
T07102
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03030
DNA replication
dmm03430
Mismatch repair
dmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
dnm_065670 (dnaE)
03430 Mismatch repair
dnm_065670 (dnaE)
03440 Homologous recombination
dnm_065670 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmm03032
]
dnm_065670 (dnaE)
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_065670 (dnaE)
Enzymes [BR:
dmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
dnm_065670 (dnaE)
DNA replication proteins [BR:
dmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
dnm_065670 (dnaE)
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
dnm_065670 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
CcmE
Vit_open_b-sht
Motif
Other DBs
NCBI-ProteinID:
QTA90506
UniProt:
A0A975GQY6
LinkDB
All DBs
Position
complement(5231711..5235115)
Genome browser
AA seq
1134 aa
AA seq
DB search
MNAVAITDHGTMFGSVEFYEKTKKAGIKPIIGCECYLAPRRLTDKSAADAKRLSHLVLLA
KNPEGYRNLCKMASVAQLEGFYYKPRIDKELLTQHSKGLIALSACLHGEIPRLIAENRSE
EADKAARFYLDLFGENNFFLEVQNNGIEIQEKVNQALLDMSQRLSIPLVASNDCHYLNKE
DVRAHEVLLCIQTGKTMNDPDRFKFGTDQLYFKSGEEMYADFKDYPGAIENTVSIAERCN
IEFDFNTYHFPKFDSESDLTADEIFDQKVREGYQKRLAFIKEKNPDIDEQVYKERLEYEI
SIIKKMGFPGYFLIVADFIQYAKENHVPVGPGRGSAAGSIVAYSMGITDLDPIEHGLIFE
RFLNPARISMPDIDVDFCINGREKVFKYVVERYGGGDYVAQIITFGKLKTRAVIRDVGRA
LDIPLRDVDAIAKMVPDVLNISLEDALKQEPRLRELAEQRAEIADLIKISRVLEGLPRHA
STHAAGVVIGDKPLAEYLPLYKGKKGEVVTQFDMKYVEQIGLVKFDFLGLRNLTVIESAL
SLIEAQHGNAPDLLDLDFNDAETYHLLSSGDTTGVFQLESSGMKDLLVRLKPACFADVTA
LVALYRPGPLDSGMVDDFVERKHGRKKVEYIVPELEPILNETYGVIVYQEQVMKIAGVLA
NYSMAEADGLRKAMGKKIAEIMAEHRGRFVKGATENNIPADKAKQLFDLMEKFGGYGFNK
SHSAAYALIAYQTAYLKAHYPVEFMASLLTSEMHSIDGVVKYIAECRSHDIPVLPPDINE
SGKEFTVSGNKIRFGLVAVKNVGEGAIEAIIEARENKGRFSSLFDFCENVDLKKVNKRVI
ENLIKCGAFDSTGAFRSQMAAATEDAIDYGQRVQKEKNSPQMGLFDMGENTEKINAPSLP
KIEEWDDKNRSVLEKESLGFYITGHPLSRFEDTVSKFTNANALTLKEKNNGEMVRIAGIV
TNVKGYKDRKGGNMAFITTEDLHGSVETTVFSSVYTPMRDILTDDAPIIIEAEVQKEENS
VKLVANKIIPLDKAEETWTANIHLKLDINKTTKDSLLKLHEIMKKHPGSCQTYLHLINQK
TDIKIALADTMKLNPGSSLTREINGLVGYDAVRTTCKAPSSENVQPKNKYRQTR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtggccattacagaccatggcaccatgttcgggtctgttgaattttatgaa
aaaaccaaaaaagccgggataaaaccgatcatcggctgcgaatgttatcttgccccgcgc
cgccttaccgacaaaagcgcggccgatgccaaaagactttcccacctggttctcctcgcg
aaaaaccccgagggataccgtaatctctgcaaaatggcgagtgtggcccagcttgaggga
ttttattacaaaccccgaattgacaaagagcttttaacacagcatagcaaaggactgatt
gccctgtccgcatgtctgcacggggaaattccccgtctgatcgcggagaatcgctcagag
gaggctgataaggcggcccggttttatcttgatctttttggggagaacaatttctttctt
gaggttcaaaataatggcattgagattcaggaaaaggtgaatcaggcccttttggatatg
agccagcgtctttcaattcccctggtggcttccaatgactgccactatctcaacaaggaa
gatgtccgcgcccatgaggtgctgctgtgtatccagaccggcaagaccatgaatgatccg
gaccggtttaagttcggaacagaccagctttattttaaatccggggaggagatgtacgcg
gatttcaaggattatcccggagccattgaaaatacggtgagtattgcggagcgatgcaat
attgaatttgatttcaatacctatcatttcccaaaatttgattctgagtccgatctgacc
gcggatgaaatatttgatcaaaaagtccgggagggataccaaaaaagattagcatttata
aaagaaaaaaatcccgatattgacgaacaggtttacaaagagcgtctggaatacgagatt
tcaatcataaaaaagatgggatttccgggatattttctgattgtcgcggattttatacaa
tatgccaaagagaatcatgtgccggtaggcccgggtcgcgggtctgctgcgggcagcatt
gttgcctattccatgggaattaccgacctggaccccattgaacacggccttattttcgag
cggtttctgaatcctgcccgtatcagtatgccggatattgatgtggatttctgtattaat
ggcagggaaaaggtctttaaatatgtggtggaacgatatggcgggggtgattatgtggcc
cagatcatcaccttcggaaagctcaaaacccgggctgtcattcgtgacgtgggacgtgcc
cttgacattcccctgcgggatgtggatgccatcgccaagatggtcccggatgtcctgaac
atcagccttgaggacgcgttaaagcaggaaccgagactcagggaactggcggaacaacgg
gctgaaattgcggatctgataaaaatttcccgtgtgcttgaaggacttccgagacacgcg
tcaacccacgcagccggtgttgtgatcggtgacaagcctcttgcggaatatctcccgctg
tacaaaggtaaaaaaggcgaagttgtgacccagtttgacatgaaatatgtcgagcaaatc
gggctggtgaaattcgatttcctgggacttcgcaacctcacggtgattgaaagcgcgctt
tcgctcatcgaggcccagcatggcaacgcccctgatcttttggacctggatttcaatgac
gctgaaacgtatcacctcctttcctccggggataccaccggtgtgtttcagttggaaagc
tccggcatgaaagacctccttgtgagattaaagcccgcatgtttcgcggatgttacggca
ctggtcgcgctgtatcgtcccgggccccttgacagcggcatggtggatgattttgtggaa
agaaagcacggcagaaaaaaggtggaatatattgttcccgaacttgagccgatcctgaat
gagacttacggcgtgattgtctatcaggaacaggtcatgaagattgcgggggtcctggcg
aattattccatggccgaggccgacgggctgcgtaaggcaatgggaaagaaaattgctgag
atcatggccgagcatcgggggcgttttgtaaaaggggccacggagaataatatcccggct
gacaaggcaaagcagctctttgatttaatggaaaaatttggggggtacggatttaacaaa
tctcattccgcggcctatgccctcattgcctatcagaccgcgtacctgaaagcccattat
cccgtggagttcatggcgtcgcttctcaccagtgaaatgcactccatagacggggtggta
aaatatattgcagaatgccgcagtcacgacattcctgtgcttccgccggatatcaatgag
agcggcaaagaattcacggtcagcggaaacaagatcagattcgggcttgtggctgtcaaa
aatgtcggggagggggccattgaggccattatcgaggcaagagaaaacaaaggcagattt
tcttccctgtttgatttttgcgaaaatgtggatctgaaaaaagtcaacaagcgggtcatt
gaaaacctgatcaaatgcggggcctttgattccaccggggctttccgttcccagatggcg
gccgcaactgaggatgccattgattacgggcaaagggttcagaaagagaaaaacagtccc
cagatggggttgtttgatatgggagaaaataccgagaagatcaacgccccttccctgccg
aaaatagaggaatgggatgacaagaatcgctcggttttagaaaaagaatctctgggtttt
tatatcaccggacatcccctgagccgatttgaggatacggtcagcaagtttaccaatgca
aatgccctcacgttaaaagagaaaaataatggcgagatggtgagaattgccgggattgtc
acaaatgtaaaggggtataaggacagaaagggcgggaatatggcgtttattaccacagaa
gacctgcacggttctgttgagacaaccgttttttcttcggtttacacgcccatgagagat
attctcacggatgacgcgcccattattatcgaggctgaggtgcaaaaggaggaaaattcg
gtaaagctggtggcaaacaagattattccgctggacaaagcagaggagacgtggaccgca
aatattcatttaaagctggatatcaacaagacgaccaaggattcactgctcaaattacat
gagattatgaagaaacatcccggatcatgccagacatatcttcatctgataaaccaaaag
acagatatcaaaattgccctggctgacacaatgaaactgaatccggggtcgtcgctcacc
cgtgagatcaacggattggtggggtatgatgcggtgagaacaacgtgcaaagccccttct
tctgaaaatgttcagccaaaaaataaatatcggcagacaagataa
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