Desulfonema magnum: dnm_093120
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Entry
dnm_093120 CDS
T07102
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dmm
Desulfonema magnum
Pathway
dmm00550
Peptidoglycan biosynthesis
dmm01100
Metabolic pathways
dmm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
dnm_093120 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
dnm_093120 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dmm01011
]
dnm_093120 (mrdA)
Enzymes [BR:
dmm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
dnm_093120 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dmm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
dnm_093120 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Rossmann-like
RAMP4
Motif
Other DBs
NCBI-ProteinID:
QTA93212
UniProt:
A0A975BX90
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All DBs
Position
complement(7438261..7440156)
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AA seq
631 aa
AA seq
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MDKYLDTADRNWYKHRLVTAMIYVMLAFVVLGGRLFQLQVLEGEEFRRFSENQSIRLQSI
EPPRGLIFDRKGNLLADNRPSFDLSIILKDAGPAEMTLEKLSKYADIPKSQLMSKIRAGR
GIPSYKPVLLKQDIGRDVLAAIEVHRFDLPGIVIEVRQKRFYAQGRTAAHVTGYMGEISA
AELSYWKDMGYRTGDFVGKFGVEKSSERFLRGKRGGRQVEVNAKGQVIRVLRTVDAEPGQ
NIFLTIDQELQQKAELLMEGIPGAVVAMDPGTGHILAMVSSPSFDPNTFIGGMSHREWNA
LISDPFRPMENKVIQGEYPPASTYKIVTAIAGLEEGVINRNTTYFCPGYHRYGNNIFRCW
KRSGHGSVDIVKALAGSCDVFFYQVGLRLGVDRLADYAGACGLGTLTHVDLNHEARGLIP
TSEWKEKRMGVPWQKGENLSIAIGQGYNLVTPLQMAVLTAAVANGGILYRPLIVKKRETV
EGRTVYRGDREIVGRLPVSRKNLDIVRKGLWEVTHGRAGTARVARVRGLGISGKTGTAQV
VSRKRKSGDRRVRSLHLKSHAWFVAYAEPDDPRIAVAVLVEHGEHGSGTAAPIARELIKM
FMGFQGVPDVSVVSDPGDVPVLYEFSGGPFF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatttagatactgctgacagaaattggtataagcacagactggttacggcc
atgatttatgtgatgctggcttttgttgttctgggaggccggctgtttcagcttcaggtg
cttgaaggggaggagttcaggaggttttctgaaaatcagtccatccggctgcagagcata
gagccgcccagggggctgatttttgatcgcaaaggaaatttgctggcagacaaccggccg
tcttttgatctgagtatcatattaaaagatgccgggcctgcggaaatgactttggaaaag
ctttccaagtatgcggatattcctaagagccagctgatgtcaaaaatcagagccggcaga
ggaattccttcttataagccggttctgctgaaacaggatatcgggagggatgtgctggcc
gcaattgaagttcaccggtttgatctgccggggattgttattgaagtgaggcagaagcgg
ttttatgcgcagggacggacagctgcgcatgtgacaggatacatgggggagataagtgcg
gccgaactgagttattggaaagatatggggtatcggaccggggattttgtcgggaaattc
ggagttgaaaagtcgtcagagcggtttctgagggggaagcggggggggcgtcaggttgaa
gtgaatgccaaaggacaggtgatccgggtgctgaggaccgttgatgcggagcccgggcaa
aatatttttctgacaattgatcaggaactgcaacagaaagcggaactgcttatggaagga
attccgggagctgtggtggccatggatccgggcacagggcatattctggccatggtgagc
agtccgtcttttgatcccaatacctttatcggaggaatgtctcacagagaatggaatgcg
ctgatttccgatcctttcaggcccatggagaacaaagtgattcagggggaatatccgccg
gcatccacttataaaattgtgactgccattgcggggctggaagagggagttatcaacaga
aatacaacatatttttgtccgggataccatcggtatgggaataatattttccggtgctgg
aaaagaagcggtcatggttcagttgacattgtgaaagcgctggccggatcctgtgatgtt
tttttttatcaggtgggactgcggctgggagtggaccgtcttgcggattatgccggggca
tgcggactcgggacactgactcatgtggatctgaatcatgaggcccgggggctgatcccc
acatcagaatggaaggaaaaacgtatgggggttccgtggcagaaaggggagaatctgtca
attgccattggtcaggggtataatcttgtcacgccgttgcaaatggctgtgctgacagct
gctgttgcaaacggtggtattttgtaccggccgctgatagtgaaaaaaagggagactgtc
gagggccggaccgtttacagaggcgacagggaaattgtcggcaggcttcctgtgagcagg
aagaatttggatatagtgagaaagggtctgtgggaagtgacgcatggcagagccgggact
gcccgggtcgcccgggtcagggggcttgggatcagcgggaaaactgggactgcccaggtt
gtgagccgtaagagaaagagcggtgaccgcagagtgagatcgcttcatctgaagtcacat
gcctggtttgtggcttatgcggagcctgatgatccccggattgccgtggcagttcttgtg
gaacacggagagcatgggtcgggtacggctgctccgattgcgagggagcttattaagatg
tttatgggttttcagggggtgccggatgtttctgtggtttctgatcccggggatgttccg
gtgttgtatgagttttcggggggtccttttttttga
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