Drosophila miranda: 108152855
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Entry
108152855 CDS
T06132
Name
(RefSeq) histone deacetylase HDAC1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dmn
Drosophila miranda
Pathway
dmn03082
ATP-dependent chromatin remodeling
dmn03083
Polycomb repressive complex
dmn04213
Longevity regulating pathway - multiple species
dmn04330
Notch signaling pathway
dmn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108152855
03083 Polycomb repressive complex
108152855
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108152855
04350 TGF-beta signaling pathway
108152855
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
108152855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmn03036
]
108152855
Enzymes [BR:
dmn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108152855
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108152855
HDAC complexes
Sin3A-HDAC complex
108152855
BRAF-HDAC complex
108152855
REST complex
108152855
SHIP complex
108152855
MiDAC complex
108152855
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108152855
Heterochromatin formation proteins
Other heterochromatin formation proteins
108152855
Chromatin remodeling factors
NuRD complex
108152855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
108152855
NCBI-ProteinID:
XP_017137963
LinkDB
All DBs
Position
XR:complement(8930885..8933748)
Genome browser
AA seq
530 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRAYKGQRKRPRLDKDNNSNKASSEASSEIKDEKEKVDGADGEESTASN
ANSNSNNNSSSNNKSDNDSSAPASGATTGGGSGSGSGSGSGAKVAKENNI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccgcacaaagccactgccgat
gagatgaccaagttccattcggacgagtacgtccgatttctgcgatccatcaggccggac
aacatgaccgaatataacaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggtggtctgcatcatgcg
aaaaaatcagaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctcaagtaccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccaccgaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctgcgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctgcccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gacattgccaacgaactgccctacaacgactacttcgagtactttggccccgacttcaaa
ttgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaaccggttgttcgagaacctgcgcatgctgccacacgcaccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtgcccgagaacgagtactcggac
tcggaggatgagggcgagggcggacggcgggacaaccgcgcatacaagggacagcgcaag
cgtccgcgcctcgacaaggataacaacagtaacaaggcatcctcagaggcgtccagcgag
attaaggatgagaaggagaaggtagacggcgctgatggcgaagaatcgacggcatccaat
gccaacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagt
gcgccagccagcggggcaacgactgggggcggctcaggatcgggttccggctccggttcg
ggggccaaggtcgccaaggagaacaacatatga
DBGET
integrated database retrieval system