KEGG   Drosophila miranda: 108152855
Entry
108152855         CDS       T06132                                 
Name
(RefSeq) histone deacetylase HDAC1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dmn  Drosophila miranda
Pathway
dmn03082  ATP-dependent chromatin remodeling
dmn03083  Polycomb repressive complex
dmn04213  Longevity regulating pathway - multiple species
dmn04330  Notch signaling pathway
dmn04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108152855
   03083 Polycomb repressive complex
    108152855
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108152855
   04350 TGF-beta signaling pathway
    108152855
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    108152855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmn03036]
    108152855
Enzymes [BR:dmn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108152855
Chromosome and associated proteins [BR:dmn03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108152855
   HDAC complexes
    Sin3A-HDAC complex
     108152855
    BRAF-HDAC complex
     108152855
    REST complex
     108152855
    SHIP complex
     108152855
    MiDAC complex
     108152855
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108152855
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108152855
  Chromatin remodeling factors
   NuRD complex
    108152855
SSDB
Motif
Pfam: Hist_deacetyl Herpes_capsid
Other DBs
NCBI-GeneID: 108152855
NCBI-ProteinID: XP_017137963
LinkDB
Position
XR:complement(8930885..8933748)
AA seq 530 aa
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRAYKGQRKRPRLDKDNNSNKASSEASSEIKDEKEKVDGADGEESTASN
ANSNSNNNSSSNNKSDNDSSAPASGATTGGGSGSGSGSGSGAKVAKENNI
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccgcacaaagccactgccgat
gagatgaccaagttccattcggacgagtacgtccgatttctgcgatccatcaggccggac
aacatgaccgaatataacaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggtggtctgcatcatgcg
aaaaaatcagaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctcaagtaccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccaccgaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctgcgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctgcccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gacattgccaacgaactgccctacaacgactacttcgagtactttggccccgacttcaaa
ttgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaaccggttgttcgagaacctgcgcatgctgccacacgcaccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtgcccgagaacgagtactcggac
tcggaggatgagggcgagggcggacggcgggacaaccgcgcatacaagggacagcgcaag
cgtccgcgcctcgacaaggataacaacagtaacaaggcatcctcagaggcgtccagcgag
attaaggatgagaaggagaaggtagacggcgctgatggcgaagaatcgacggcatccaat
gccaacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagt
gcgccagccagcggggcaacgactgggggcggctcaggatcgggttccggctccggttcg
ggggccaaggtcgccaaggagaacaacatatga

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