Drosophila miranda: 108162614
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Entry
108162614 CDS
T06132
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108162614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108162614
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108162614
Spliceosome [BR:
dmn03041
]
Complex A
U2 snRNP components
U2 related factors
108162614
Complex B
108162614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
EF-G-binding_N
Motif
Other DBs
NCBI-GeneID:
108162614
NCBI-ProteinID:
XP_017152924
LinkDB
All DBs
Position
XL:11082623..11087042
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AA seq
1248 aa
AA seq
DB search
MSKSSGRDRERERDRDRDRERERDSKHESRGSRDNHPHESRGSRDYEMSKSRNGGGNSAG
GSSRGSRDDRKRGKELSSRDKDNDRGRRDDKRRRRSWSKEYDKDKRQDKERDRDRDRQRE
REKDRERDKDKERDREKDRDRERDRERHRDRETERRHPVAVAPLVIRLSSSSSSDAEVEE
IDKEEQQRRLEQEMIKRRERIERWRAERKRENKASAPAVVKTAKKWSLEDESEEDDSNHA
PPLDSSAKKDTEEPDSPPSKFHSIRKRFDDDVVEAKFLPMKRPTFSKTFGVKLGIGLSPT
PSTSKSNKVDKKEIPGGDTKSKIKKESEASKPIEPKVEPKNEENTPPLPPVGPPVGPPEP
PPPATAAAAAPAPAVVVPEAAAAVVKQEPAEAKQEEPKKQPEEEIDPLDAYMQEVNKEMR
RVNNFVEPPSQTQGVVILTGVAKKKSTESKKGELIEQNMDSLEYSSEDELEDIRDTAVNL
AMKHRKELAKIDHSSVSYAPFRKNFYVEVPELSRMTPSDVEKYRTELEGVQVKGKGCPKP
IKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPM
FRHILDQPNLDEGDGAIAIIMAPTRELCMQIGKDIRRFSKSLGLRPVCVYGGTGISEQIA
ELKRGSEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRVIDNV
RPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHVVILNDESKFFKLL
ELLGVYQEAGSIIVFADKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKV
RLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRY
AGDIIRALDLSGCLVPAELQTLWTEYKSAQEAEGKKVHTGGGFSGKGFKFDEQEFNAVKE
SKKLQKAALGLADSDDDEDFEQDIDQQIEQIFAAKRTVKDTSITAATAAAAAAAAAAAAV
GGNAALATAAAQVAAAATAANLAMASASSTTGAGQQATPGIVMSSDKLELAKRLASKINS
SKNLDTKSSQVSSVEPILKGHPAAGSVLTARTVAEQMAAKLNNKLNYQPKEDEEAIGTLI
ANSNSFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKPPPEGE
RKLYLAIESCSELAVQKAKREITRLIKEELLKLSSSHHVFNKGRYKVV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagctcggggcgtgaccgggagcgagaacgcgaccgggacagagatcgcgag
cgggagcgcgacagcaagcatgagagccgcggcagtcgggataaccatccacatgagagc
cgtggcagtcgggactatgagatgagtaaatctcgtaatggaggcggcaacagtgccggt
ggcagttcgcgtggcagccgcgatgaccgcaagcgtggcaaggagctgtctagtagggac
aaggacaatgatcgcggacggcgtgatgacaagcgacggcggcgatcctggtcgaaggag
tatgataaggataagcgccaggacaaggaacgcgacagagatcgcgaccgtcagagggag
agggaaaaggatcgggagcgtgacaaggataaggaacgcgacagggagaaggatcgggat
cgcgagcgggaccgcgaacgtcacagagatcgtgagacagaacgacgacatccggtggcc
gttgcccccctagtcatccgcctgtcctcctccagctcttccgatgcggaggtggaagag
atcgacaaggaggagcaacagcgtcgcctagagcaagagatgatcaagcgtcgcgagcgc
atcgagcgttggcgggccgaacggaagcgtgaaaacaaagcgtccgcaccagccgttgtg
aaaacggctaaaaagtggagcctggaggacgagtccgaggaggacgacagcaatcacgca
cctccgctggatagcagcgccaagaaagacacagaggagcccgactcgcccccatccaag
tttcacagcattcgcaagcgtttcgatgatgatgtggtcgaagcgaaattcttgcccatg
aagcgtcccacctttagcaagaccttcggtgtgaagctcggcataggtttgtctcccact
ccgtctacgtccaaatcgaacaaagtcgataagaaggagattcccgggggagataccaaa
tcgaagatcaagaaagagtcagaggctagcaaaccaattgagcccaaagttgagcccaaa
aatgaagagaacaccccaccactaccaccagtaggaccaccagtaggaccaccagagcca
ccaccaccagcaacagcagcagcagcagcgccagcaccagcagtggtggtgccagaggca
gccgcagcagtcgtcaagcaggagccagccgaagcgaaacaggaagagcccaagaagcag
ccggaagaggagattgatccgttggatgcctacatgcaggaggtcaacaaggagatgcga
cgcgtcaataactttgtggagccgcccagccaaacccagggcgttgtcatactcacgggc
gttgccaagaagaagtcaactgagtccaaaaagggcgaactgattgaacagaatatggac
agcctggagtactcgagtgaggatgagctggaggacatacgcgacacggccgtcaatctg
gcaatgaagcatcgcaaggagctggctaaaatcgatcactcatcggtgagctatgcccca
tttaggaagaacttttacgttgaagtgcccgaattgtcgcgcatgaccccatcggatgtg
gagaagtatcgaacggagctggagggtgtccaagtgaaaggcaagggctgtccaaagccc
attaagacatgggcacagtgcggcgtcagcaagaaagagatggatgtgctgcggaagctg
ggctttgaaaagcccacgccaatccagtgccaggccataccggctatcatgtccggacgg
gatctgataggtattgctaaaactggcagtggcaagacgttggcattcattttaccaatg
tttaggcacatcctggaccagccgaacctcgacgagggcgatggtgccatcgctatcata
atggcaccgacgcgcgaactctgcatgcagatcggcaaggacatcaggcgcttcagcaag
agtctgggcctgcggccagtctgcgtttacggcggcactggcatttccgaacagatcgcc
gaactgaagcgcggctctgagataattgtgtgcacaccaggacgcatgatcgatatgctg
gccgcaaactcgggccgtgtcaccaatctgcgtcgcgtcacgtacgtcgtgttggacgag
gccgaccgcatgttcgacatgggcttcgagccgcaggtgatgcgggtcattgacaatgtg
cgcccagatcggcagacggtgatgttcagcgccacattccctcggcaaatggaggccctg
gcgcgtcgcatcctgaagaagcccatcgaggtgattgtcggcggccgatcggttgtgtgc
aaagatgtggaacagcatgtggtcatactcaacgacgagtccaagttcttcaagctcctg
gaactgctgggcgtctaccaggaggcgggcagcatcattgtctttgcggacaagcaggag
aatgccgacattctgctgcgcgatctcatgaaggcctcgtatccctgcatgagtctccat
gggggcatcgatcagtttgaccgtgactccactatcattgactttaagtccggtaaggtg
cgtctcctgattgccacctcggtggcggcacgcggcctcgatgtcaaggatctcatcctg
gtggtcaactacgatgtgcccaatcactacgaggactatgtccacagatgtggtcggacc
ggtcgtgcgggcaaaaagggtagcgcctacacgttcatcacacccgaacagtcgcgctat
gcaggcgacattatacgggcgctagatctctctggttgcctggtgcccgctgaactgcag
acgctgtggaccgaatacaagtctgcccaggaggccgagggcaaaaaggttcacactggt
ggcggcttcagcggcaaggggttcaagtttgacgagcaggagtttaatgcggtcaaggag
agcaagaagctgcagaaggccgccttgggtctggccgattcggacgacgacgaggacttc
gagcaggacattgaccagcagatcgagcagatctttgccgccaagcgcaccgtcaaagat
acttcgattacggctgccactgcagctgctgccgcggctgctgccgccgccgctgctgtc
ggtggcaatgcggccctggccacagcggccgcccaagtagcagcggcggctacggcagcc
aatctggcaatggcctcggcatcatcgactacaggagctggacaacaggcgacgcccggc
attgttatgagttccgacaaattggaattggcaaagcgtctggcatcgaagatcaacagc
agcaagaacctggacacgaagagcagccaggtgtcgtcagtggagcccatactgaagggt
caccccgcagcgggttccgtgctaacggcccgaacggtagccgagcagatggccgccaag
ctgaacaacaagctcaactatcagccgaaggaggatgaggaggccattggcaccttgata
gccaatagcaattcgtttaccaaatacgaggaggagctcgagatcaatgactttccccag
caggcacggtggaaggttacctccaaggaggcgctcgcccaaatctccgaatactcggag
gcgggcctaacggtgcgtggcacctatgtgccccagggcaagccgccgcccgagggcgag
cgcaagctctatctggccatcgagagctgcagcgagttggccgtccagaaggccaagcgc
gagatcacacgcctcatcaaggaggagctgctcaaactaagttcgtcgcatcacgtcttc
aacaagggtcgctacaaggtggtctag
DBGET
integrated database retrieval system
