Drosophila miranda: 117186256
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Entry
117186256 CDS
T06132
Name
(RefSeq) probable RNA helicase armi isoform X1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117186256
03015 mRNA surveillance pathway
117186256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117186256
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117186256
5.6.2.5 RNA 5'-3' helicase
117186256
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117186256
mRNA cycle factors
Common to processing body (P body) and stress granule
117186256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
Motif
Other DBs
NCBI-GeneID:
117186256
NCBI-ProteinID:
XP_033242669
LinkDB
All DBs
Position
XR:4397934..4400568
Genome browser
AA seq
190 aa
AA seq
DB search
MATYSKLFYDYELIPTVSEKDSREATLLATVQSLLGTGKPRNHGVCFFEMKGQDMQHPDS
ASWYDDLEATELYLMVLSLYCRGVTSDQIGLLTPYAKQAKTLRGMFMDTDIVMPKVDSIE
KFQGQERDIMRISTVRSTGDHISHKRIILAIARARAFLVIYGNPHLLSVDDNWRHLINHS
FISKWNTNKY
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggccacatatagtaagctgttctatgactatgaattgataccaacggtatccgagaag
gattcccgagaggccaccttgttggccacagtgcagtccctactaggtactggcaagccg
cgcaaccacggtgtctgtttctttgagatgaaggggcaggatatgcagcacccagactct
gcctcgtggtacgatgatctcgaagccacggagttatatctcatggtcttatcgctgtat
tgtcgcggagtgacttccgaccaaattggtcttctgacgccctatgcgaagcaggcgaag
acgttaaggggcatgttcatggacacagatattgtcatgccgaaggttgactcgattgaa
aagttccaaggacaggagcgcgacataatgcggatttccactgtgcgctccactggagac
catataagccataagcgcataattttggccatagcgcgcgcccgcgcatttttggtcata
tacggtaatccccatctcctcagcgtcgacgacaattggcgtcatctcatcaaccatagc
tttatttccaaatggaatacaaataaatattag
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