KEGG   Drosophila miranda: 117186256
Entry
117186256         CDS       T06132                                 
Name
(RefSeq) probable RNA helicase armi isoform X1
  KO
K14326  regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
Organism
dmn  Drosophila miranda
Pathway
dmn03013  Nucleocytoplasmic transport
dmn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117186256
   03015 mRNA surveillance pathway
    117186256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    117186256
Enzymes [BR:dmn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     117186256
    5.6.2.5  RNA 5'-3' helicase
     117186256
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     117186256
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117186256
SSDB
Motif
Pfam: AAA_12
Other DBs
NCBI-GeneID: 117186256
NCBI-ProteinID: XP_033242669
LinkDB
Position
XR:4397934..4400568
AA seq 190 aa
MATYSKLFYDYELIPTVSEKDSREATLLATVQSLLGTGKPRNHGVCFFEMKGQDMQHPDS
ASWYDDLEATELYLMVLSLYCRGVTSDQIGLLTPYAKQAKTLRGMFMDTDIVMPKVDSIE
KFQGQERDIMRISTVRSTGDHISHKRIILAIARARAFLVIYGNPHLLSVDDNWRHLINHS
FISKWNTNKY
NT seq 573 nt   +upstreamnt  +downstreamnt
atggccacatatagtaagctgttctatgactatgaattgataccaacggtatccgagaag
gattcccgagaggccaccttgttggccacagtgcagtccctactaggtactggcaagccg
cgcaaccacggtgtctgtttctttgagatgaaggggcaggatatgcagcacccagactct
gcctcgtggtacgatgatctcgaagccacggagttatatctcatggtcttatcgctgtat
tgtcgcggagtgacttccgaccaaattggtcttctgacgccctatgcgaagcaggcgaag
acgttaaggggcatgttcatggacacagatattgtcatgccgaaggttgactcgattgaa
aagttccaaggacaggagcgcgacataatgcggatttccactgtgcgctccactggagac
catataagccataagcgcataattttggccatagcgcgcgcccgcgcatttttggtcata
tacggtaatccccatctcctcagcgtcgacgacaattggcgtcatctcatcaaccatagc
tttatttccaaatggaatacaaataaatattag

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