Desulfoferula mesophilus: FAK_41880
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Entry
FAK_41880 CDS
T09861
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dmp
Desulfoferula mesophilus
Pathway
dmp03030
DNA replication
dmp03430
Mismatch repair
dmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAK_41880 (holB)
03430 Mismatch repair
FAK_41880 (holB)
03440 Homologous recombination
FAK_41880 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmp03032
]
FAK_41880 (holB)
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_41880 (holB)
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAK_41880 (holB)
DNA replication proteins [BR:
dmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAK_41880 (holB)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAK_41880 (holB)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_delta
AAA
Motif
Other DBs
NCBI-ProteinID:
BEQ17122
LinkDB
All DBs
Position
4461242..4462237
Genome browser
AA seq
331 aa
AA seq
DB search
MKLTGVIGQRRALSQLQGELEAQRLAHAYMFVGPGGVGRATTAQALFAAMNCAEPTPEGP
CGHCGPCHRLAAGTHEDFLVVAPPSQARSSQIKVEAVREAIRATGFAPFGGGKRLILIKQ
AGHLNPASANALLKTLEEPPPNNILVLTVSDAKELLPTLVSRCRKVNFLPLTAEEIAAEL
VRRGQDETDARLKSGLAGGSLGRALEMDTEALRRDLARLIDQLGAGGQALEDWGFAEELV
GAHRGSGGIDREGISQALDLLALYFRDAAVSAAGRDGLTWLPGRPASLDIESACRAFARV
RRAQGQILGNAAPELALVVLLAGLKEAPTHA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccggggtcataggccagcgccgggcgctgtcccaactgcaaggcgagctg
gaggcccagcgcctggcccacgcctacatgttcgtggggcccggcggcgtgggccgtgcc
accaccgcccaggccctgttcgcggccatgaactgcgccgagcccaccccggaggggccc
tgcggccattgcgggccctgccaccgcctggccgccggaacccacgaggactttttggtg
gtggccccgcccagccaggcccgctccagccagatcaaggtggaggcggtgcgcgaggcc
atccgggccaccgggttcgccccctttggcgggggcaaacgcctgatcctgatcaagcag
gccgggcacctcaacccggccagcgccaacgcgctgctcaagaccctggaggagccgccg
ccaaacaacatcctggtgctcacggtgagcgacgccaaggagctgttgcccaccctggtc
agccgctgccgcaaggtgaacttcctgccgctcacggccgaggagatcgccgccgagctg
gtgcgccggggccaggacgagaccgacgcccggctgaaatcgggcctggccgggggcagc
ctggggcgggccctggagatggataccgaggccctgcgccgagacctggcgcggctcatc
gaccagctgggcgccgggggccaggccctggaggactggggctttgccgaggagctggtg
ggggcccaccggggcagcgggggcatcgaccgcgagggcatcagccaggctttggacctg
ctggccctgtattttcgcgacgcggcggtgagcgccgccgggcgggacggcctgacctgg
ctgcccggccgccccgcgtctttggatattgagagcgcttgccgggcctttgcccgggtg
cggcgcgcccagggacaaatcctgggcaacgcggccccggagctggccctggtggtgctc
ttggccgggctaaaggaggccccaacgcatgcctaa
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