Dehalococcoides mccartyi CG5: X794_03765
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Entry
X794_03765 CDS
T03649
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
dmz
Dehalococcoides mccartyi CG5
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
X794_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmz03400
]
X794_03765
Enzymes [BR:
dmz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
X794_03765
DNA repair and recombination proteins [BR:
dmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
X794_03765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
COPR5
Motif
Other DBs
NCBI-ProteinID:
AII60940
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All DBs
Position
691927..692481
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AA seq
184 aa
AA seq
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MPSNPLEEYNRKRNFAQTAEPSGVKSVPSDKPVFVIQKHLASHLHYDFRLEIDGVLKSWA
IPKGPSANPKEKRLAVATEDHPMQYASFEGVIPEGEYGAGKVIVWDKGTFGNLKEGKTLA
ESYDTGHLVINLQGKKLKGGYSLLRTKMGWLMVKMEDAFADRLSDILNEQPASVITGKLV
EEII
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaaccctctggaagaatataatcgcaagcgtaattttgctcaaactgccgaa
ccatcaggagtaaaaagcgtaccctctgacaagcccgtatttgttattcaaaaacatctt
gccagccatctgcattatgatttcagattggaaattgatggggtattaaaatcatgggct
attcccaaaggaccttctgccaatcccaaagaaaaacgattggcggttgctaccgaagac
caccctatgcagtacgcatcttttgaaggggtaatacccgaaggggaatatggtgcgggc
aaagtgatagtgtgggacaaaggcacttttggcaacctgaaggagggtaaaacactggct
gagtcttatgatacagggcatttggttataaaccttcagggtaaaaaactgaaaggcgga
tattcgcttttacggaccaaaatgggctggctgatggtgaagatggaagatgcatttgct
gaccgtttgtcagatatacttaacgaacaaccggcttcggtaataactggtaaactggta
gaagaaattatttaa
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