Dromaius novaehollandiae (emu): 112984532
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Entry
112984532 CDS
T07572
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112984532 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dne03400
]
112984532 (LIG4)
Enzymes [BR:
dne01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112984532 (LIG4)
DNA repair and recombination proteins [BR:
dne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112984532 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
SKA1
Motif
Other DBs
NCBI-GeneID:
112984532
NCBI-ProteinID:
XP_025958255
Ensembl:
ENSDNVG00000005600
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASTPASQPSPKKTVASQVPFADLCCTLERMQTCKSRPEKTKYFKEFLDSWRRFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
AGSRGDAGDFAMIAYFVLKPRCPKQGRLTVEQVNELLDAIANNNAAKNKGLLKRSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGASPLEGSLTPFIHKVFKSNVQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EESDLQTCYCVFDVLMVNNQKLGHETLSKRYEILSDVFTPVTGRIHAVHKTSARTRKEVI
DALNEAIDNREEGIMVKDPVSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPRIFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEVYIEPCNSVIVQIRAAEIVNSDMYKTDCTLRFPRIERIREDKEWYECMT
SDMLEHLRSKAEGKLASKHLHIDDDEPQEKKKKTVPKVKKIIGIAEQFKAPDLSNINKVS
NVFEDVEFCVMTGTGRYSKSELESKIAECGGSVVQNPGSDTYCVIVGTENVRVKNIIASN
KYDVVKAEWLLQCFQTKMLVPWQPAFMIHMCPDTKEHFAREYDCYGDSYTADADVAQLKE
VFSRMKDNKTMPLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVSEPRTKIHGTRLSI
RALELRFYGAKVVPHLEEGVSHVVIGEDHSRVKEMKALRRTFDKKFKIVSELWVTKSVEE
GVLKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacacctgcttcacagccttctcctaaaaaaacagtagcctctcaggtgcct
tttgcagatctgtgctgtactctggagcgaatgcagacatgtaaatctcggccagagaaa
accaagtatttcaaggaatttctggattcctggaggaggttccatgatgctcttcatcaa
aaggagaaagatgttacagattctttttacccagcaatgcgacttattcttcctcagttg
gaaagagaaaggatggcatacggaattaaagaaactatgcttgcaaagctgtatattgaa
ctgcttaatttaccgaaagatggaaaagatgctgcaaagcttttaaattacagaacacct
gctggctcacgtggagatgctggagattttgcaatgattgcatactttgtattaaaacct
aggtgcccaaaacaaggcagactgacagtagaacaagtcaatgagctcttagatgcaata
gctaataataatgctgccaaaaacaagggtctattaaagagaagtctccttcagttaatt
actcagagctcagcacttgaacaaaaatggcttatccgaatgattataaaggatctaaaa
cttggtgttagtcaacaaactatattttccatttttcatcctgatgctgctgaattacac
aatgtcacaactgatttggaaaaagtctgtagacaactgcatgatcccactgtctcactt
agtgatgtttctatcatgttattttctgcctttaaaccaatgcttgctgctattgctgat
gtccagcaaattgagaaacaaatgaataatcaggtattctacatagaaactaaactggat
ggtgagcgtatgcagatgcacaaagatggagatgtatataagtatttttcccgaaatggg
tatgactatactcagcagtttggtgcttcaccgcttgaaggttcattaactccgtttatt
cataaagtatttaaaagtaatgtgcaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagacacaaacattcatgcagaaaggaaacaaatttgacataaaaagaatggtg
gaggaatctgatctgcagacttgctactgtgtgtttgatgtattgatggttaacaatcaa
aagttgggccatgaaacactaagcaaaagatacgagatcttaagtgacgtattcacccca
gtaacaggtagaatacatgctgtacataaaacaagtgccagaactagaaaagaggtaatt
gatgctttaaatgaagcaatagataatagagaggaaggaattatggtgaaagatcccgtg
tccacttacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
agtgggttgatggatgaactggaccttttgattgttggtggttactggggaaagggctca
cgtggtggaatgatgtctcattttttgtgcgctattgcagagactccacctccaaatgaa
aaacccaggattttccactctatttgtcgtgttggctctggttatactatgaaggaattg
tatgatctgggtttgaaactggctaaacactggaagccctaccataggaaggaccctcca
tgcaacattttgtgtggaactgaaaaacctgaagtatacattgaaccttgtaattctgta
atagttcagattagggcagctgagattgttaacagtgacatgtataaaactgattgtact
ttgagattyccccgaattgagagaataagagaggacaaggaatggtatgaatgcatgact
tcagacatgttagaacatctcagaagcaaagcagaggggaagctggcctctaaacacctc
catatagatgatgatgagccacaagagaaaaaaaagaaaactgtaccaaaggtgaagaag
ataattggaatagctgagcagtttaaagcccctgatctttctaatataaacaaggtttca
aatgtattcgaagatgttgaattttgtgttatgacaggaacgggaagatattcgaagtct
gaattagaaagcaaaatagctgaatgtggcggaagtgtggtacagaaccctggatcagac
acttactgtgtcattgtaggaactgagaacgtgagagtgaaaaacatcattgcttccaac
aagtatgatgtggtgaaggcagagtggctcctccaatgttttcaaaccaaaatgcttgta
ccttggcagcctgcctttatgattcacatgtgtcctgacacaaaagaacattttgctcgt
gagtatgattgttacggagacagctatacagcagatgctgatgttgcacaactaaaggaa
gtgttctcaagaatgaaagataataagacgatgcctttggacgtgattgctgaattagaa
gaacgttattcatggaacagctgccaactcagtatattcagaggaaacactatttatgtg
gactgttatgctgttgttagtgaacccagaacaaaaattcatggaacaagactatcaatt
agagctttagagctccgattttatggtgcaaaagtagtccctcacctagaagagggtgtg
tcccatgtcgttataggagaagatcactcccgggtaaaagaaatgaaagcactgaggaga
acatttgataaaaaatttaaaattgtatctgagctatgggtaaccaaatcggtagaggaa
ggagtcctaaagaatgaaaatcaatacttaatttaa
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integrated database retrieval system