Drosophila navojoa: 108657087
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Entry
108657087 CDS
T05898
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108657087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dnv03400
]
108657087
Enzymes [BR:
dnv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
108657087
DNA repair and recombination proteins [BR:
dnv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108657087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
ANAPC2
Sec10_N
Motif
Other DBs
NCBI-GeneID:
108657087
NCBI-ProteinID:
XP_017965023
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MDISNTIKFRDICKMMQRVKEAKTMQRKEIILKRYYDSFCKHRDAFRQGASLTANQTEDG
ATSFYPVLRLLLPGADTARDNYGLQITALGRLYSRILQVAKDSSDYIRLQNRTASSFRDY
ADVVYAVLHPRCHNEPSNLTLKQIHDMLDIIASEDTTVKERELTRFTELASAEEQKWLIR
ILLKSMGLGIGEQRIFGLLHPLAKDMYQRCSDLKRICVLLADNNIAQEASSTRAVNASGA
TSSTVINLNTIIEPFQLIRPMLCERFPGKIESLMESDVLYLERKMDGERFQLHYARGMFK
YISRNGADYTRSFGGSYETGTLTPHLRTLLPLGMESIILDGEMMIWDTQQMRYREKGENT
DVKHLKPDRSWRPCFVVYDLLYLNGESLLDMTYVQRAYKLQELLTEQQGILQIMRGQKIT
SLDHFNTLFQQMLDSNAEGIVLKKQNSIYRPGVRVGGGWYKDKADYIEGLITEFDVLIIG
GFYNRKRTFIESFLLGVLKPGGGTERDEVYSIGCVANNTRQRGVLHNELKPHWRNASTDP
PPLWYHYRPNEKEGAPDVWIQPENSIILQVKAADLTPNGAYYTPKSLHFPRTQMMRIDKV
WHECMTLEEYTQLCQGRGAIKKLNKRPANLSDFTTERKRQKITPAERNRLGLAAYEKRYD
AEPLESNSQLFEGFTFCILSGCREHSKQELQVLAAQNGGTIVQNPLPNDPKCICIAGDPV
YLVKRLMQQQPRTNDILRMDWLLRVCNKQQIDLRPRDVLSATEALQLQFAKSFDRFGDSF
TDLFESIDELEEVLQDISDTELDSLDVDEHELEKLEQQLLGSESLNIFSKHYACMYNRDA
DELARLLFIQRGGQLVSETEEPNPTLVLVCPNRLNPQDFEQWYQTHFTAQPVQVVSTDWI
RQSHRVRCALPTAEYLIKF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcaaacacaattaaatttcgtgacatttgcaaaatgatgcagagagttaaa
gaggcaaaaactatgcaacgcaaggagatcatattgaagcgatactacgattccttctgc
aagcatcgagatgcttttcgccagggcgctagtctaacggcaaatcaaacagaggatggt
gccaccagcttttatccagtgctgcgccttctactgcctggcgcagatacggcacgcgat
aactacggtctacagataacagcactggggcgactctactcgcgcattttacaggtggcc
aaagattctagtgattatatacgccttcagaatcgaactgcttcctcgtttcgcgactat
gcagacgtggtgtatgctgttctgcaccctcgctgccacaacgagccgagtaacctgacg
ttgaagcaaatccacgacatgctcgacattattgccagcgaggatacaactgtaaaggaa
cgcgaactgacacgtttcacggaactggcttcggccgaagagcaaaaatggttgatacgc
atcctgcttaagtcgatgggtttgggtattggcgagcagcgaattttcgggctgcttcac
ccgctggccaaggacatgtatcagcgttgttcggatctaaagcgcatatgcgtgctattg
gctgacaacaatatagcccaggaagcatcttctacgcgcgctgtcaatgctagtggtgcc
acctccagcacagtcatcaatttaaataccatcattgagccctttcagctaatacggccc
atgttgtgcgaaagattcccgggcaagatcgaaagccttatggagtcagatgtgctatat
ttggaaaggaaaatggatggcgagcgatttcagctgcactatgcacgcggcatgtttaag
tatatatcccgcaacggcgccgattatacgagaagctttggtggcagctacgagaccggc
accttgacgccacacctgcgcacactgctgcccctgggcatggagtcgatcatactcgat
ggcgaaatgatgatatgggacacacagcagatgcggtatcgcgagaagggcgagaacaca
gatgtgaagcatttgaaaccggaccgtagctggcgaccctgctttgtggtctacgacctg
ctctatctgaacggagagagcctgctggacatgacatatgtgcagcgcgcctataagttg
caggagctgctcaccgaacagcagggcattctgcagataatgaggggccagaaaatcacc
tcactcgaccatttcaacacgctattccagcagatgcttgactccaacgctgagggcatt
gtgctaaagaaacaaaactccatttataggcccggagtgcgtgtgggcggtggctggtac
aaggacaaagcggactacatagagggcctaatcactgagttcgatgtgctgatcattggc
ggcttttacaatcgtaagcgaaccttcatcgaatcattcctgttgggcgtgctgaagccg
ggcggcggcactgagcgcgacgaggtctatagcatcggatgtgtggccaataatacgcgc
cagcgcggtgttctccacaatgaattgaagccccattggcgcaatgcgagcacggatcca
cctccactgtggtatcactacaggcccaacgagaaagagggcgctcccgacgtctggatc
caacccgaaaattcgataatcttgcaagtgaaggcagcggatctaacgcccaacggcgcc
tactacacgcccaaatcgttgcactttccgcgcacgcagatgatgcgcattgacaaggtc
tggcacgagtgcatgacgctggaggaatatacgcaactctgtcagggtcgtggcgccatt
aagaaactgaataagcgtccggcgaacctcagcgattttacgacggagcgcaagcgccag
aagatcacgccagccgaacgcaatcgcctcggactggctgcctatgagaagcgttacgat
gcagagcccttggagagcaactctcagctatttgagggttttaccttctgcatattgagc
ggttgccgcgagcatagcaagcaggagcttcaagtgctggccgctcagaatggcggcacg
attgttcagaatcctttgccgaacgatccaaagtgcatctgcatagccggtgatccggtt
tacctggttaagcgtctgatgcagcagcagccgcgcacaaatgacattttacgcatggat
tggctgctgcgtgtgtgcaataagcagcagatcgacctacggcccagggatgtgttatcc
gcaaccgaagcgctgcagctgcaatttgcgaagagctttgataggttcggtgatagtttc
acagatttgtttgaaagcatcgatgagctggaggaagtgctgcaggacatcagcgataca
gagctcgactctttagacgtggatgagcatgagctggaaaaactggagcaacaactgctg
ggtagtgaaagcctcaacatcttctctaagcattacgcctgcatgtataatcgcgatgca
gacgagctggccaggctgctcttcatccagcgtggcgggcagctggttagcgaaacagaa
gaaccgaatcctacgcttgtgctcgtatgtcccaatcgcctcaacccccaagactttgag
caatggtatcagacacatttcactgcgcagccagtgcaggttgtcagcacggattggata
aggcaatcgcatcgcgtccgttgcgctcttcctacagcagagtatttaatcaaattttga
DBGET
integrated database retrieval system
