Diuraphis noxia (Russian wheat aphid): 107163035
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Entry
107163035 CDS
T04900
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dnx03009
]
107163035
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107163035
Ribosome biogenesis [BR:
dnx03009
]
Eukaryotic type
Pre-60S particles
Helicases
107163035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
107163035
NCBI-ProteinID:
XP_015365732
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MDEETLIGFNDIAPLKPEVKQKTGKRSGGFQAMGLSFPVLKGVLKRGYKVPTPIQRKTIP
IALENRDVVAMARTGSGKTACFLIPMFEKLTQHTVNGHRGIRALILSPTRELAVQTLKFL
KEIGKFTNLKSAVILGGDPMEAQFSTMHSAPDIIVATPGRFLHLCVEMSLKLPYIQYVVF
DEADRLFEMGFGEQLTEIIARLPETRQTLLFSATLPKVLVQFARAGLSDPVLIRLDVESK
IPDTLGLGFLNVRPEERDGALLCLLKYVVKPDSMTIIFAPTKHHVDFIHLLLDFQDIPNT
FIYSDLDPTARKINASKFQTGSVKTLITTDIAARGIDIPQLDVVINYTFPAKSKLFVHRV
GRCARAGKVGQAYSLVTRDEMCYLLDLHLFLGRPFSPVLETPKSEDDTDGLFGIVPQLLL
EEELGQLTSWYTSSIDVINSLKTCTNGYKNYIKSRPGASVDSVRRAKKINLTVIAEHPMF
QKIIAADKGRIDFVSRIKNFRPETTVFEMGQSTNSIPLLQMKLLRERNMPSVINYHRKKR
EQLDDSEGVHLKKVNLPSSDQTEISETFNDIITQRPRVTGQKKRKKVKNIKQSKQPKQAV
KSEHFIPYQPADCYTEEGLAVDNLKSSEGILDLMGDSEQSLAKQNSNKRKWDPVSHKYVT
AQSLQKNQVKKIKSESGHWIPITYKSDRYEKWQEKSKLKNSAAEGNDEEEEKKIAPLFRF
KLDTRWGRHNAKLREKQSEHRLKLDTKHILKQRIIKDHRRKKNGRKPVKKDKIRKKSAKF
NKI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaacattaattggctttaatgatatagccccattaaaacctgaggtcaaa
caaaaaactggaaaaagatctggaggtttccaagccatgggattgagttttcctgtactc
aaaggagtactcaaaaggggttacaaagttcccactcctattcagagaaaaacaatccct
attgctttggaaaaccgtgatgttgtagcgatggctcgaactggtagtggaaaaacagct
tgttttttaataccaatgtttgaaaaattgactcagcacacagtaaatggccatagaggc
atacgggcattaattttatcgccaactcgagaacttgctgttcagacattgaagttttta
aaagaaataggaaagtttactaatttgaaatcggccgtaatattaggaggtgatccaatg
gaagctcagtttagcacaatgcacagtgctccagatattattgtagcaactcctggacga
tttttacatttatgtgtagaaatgtctttaaagttgccatacattcaatatgttgttttt
gatgaagcagatagactttttgaaatgggttttggtgaacaattaacagaaatcattgct
cgtctaccagagacacggcaaacattacttttttcagccactttgccaaaagttttagtt
cagtttgctcgagctggtctttctgatcctgttctgataagattggatgtggagtcaaaa
atacccgatacacttggattaggatttttgaatgtgcgacctgaagaacgagatggtgct
ttattatgtctcctgaagtatgttgtcaaaccagattctatgactatcatttttgctccg
acgaaacatcatgttgattttattcatttacttctagattttcaagatataccaaataca
ttcatatactctgatttggacccaacagccaggaaaataaatgctagtaaatttcaaaca
ggtagtgtgaaaactctcataactactgacatagctgcacgtggtattgatattccacag
ttagatgtagttatcaactatacatttccagcaaaatctaaattgtttgtgcacagagtt
gggcgttgtgctcgagctggaaaagttggtcaagcttatagtttagtgacacgtgacgaa
atgtgttacttattagatctacatctgttcttgggtcgtccatttagccctgtacttgaa
acaccaaagtctgaagatgatactgatggtcttttcggtatcgtacctcagttgttgttg
gaagaagaacttggacagttgacaagttggtatacatcatccattgatgtgattaattct
ctgaaaacttgtacaaatggttataaaaactatatcaagtctaggcccggagcatctgtt
gatagtgttcgtagagctaagaaaattaacttgacagttattgcagagcatccaatgttt
cagaaaataattgcggcagataaaggacgtattgattttgttagccgtattaaaaacttt
cgaccagaaactacagtttttgaaatgggtcagtctacaaactcaataccattacttcag
atgaaattgttaagagaacgaaatatgcctagcgttattaactatcatcggaaaaagcgt
gaacaactcgatgattctgaaggggtgcatttgaaaaaagtaaatttaccatcaagtgac
caaactgagataagtgaaacatttaacgacattatcacacaaagaccccgtgtaactggt
caaaaaaagagaaaaaaagtaaaaaacataaaacaatcaaaacaaccgaaacaagcagtg
aaatctgagcattttataccataccaaccagctgattgttacacagaagaaggtttggcc
gttgataatttgaaatcgagtgaaggaatattagatttgatgggtgattcagaacagtca
ctagctaaacaaaattcaaataaacgtaaatgggatccagtgagtcataaatacgtaact
gcacaaagtcttcaaaaaaatcaagtgaaaaaaatcaaatctgaatctggtcattggata
ccaattacatataaaagcgataggtatgaaaaatggcaagagaaatcaaaattgaagaac
tctgcggctgaaggaaatgatgaagaagaagaaaagaaaatagcacctttgttccgattt
aaattagacactcgttggggacgtcacaatgctaaattgagagaaaaacaatctgaacac
cgtctcaaattggatactaaacacatactgaaacagagaataattaaagatcaccgtaga
aagaagaatggcagaaaacccgttaaaaaagacaagattcgcaagaagagtgccaagttt
aataaaatttaa
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