Diuraphis noxia (Russian wheat aphid): 107166854
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Entry
107166854 CDS
T04900
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107166854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107166854
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107166854
Spliceosome [BR:
dnx03041
]
Complex A
U2 snRNP components
U2 related factors
107166854
Complex B
107166854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107166854
NCBI-ProteinID:
XP_015371161
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MVRSGSDRIHRKRSRSRSRSPRRHRRSSRSRSRSPRHKLHKSIRDRKKSRSPRRSRSPRN
KRKSPERKPEEVPFDPTNPDKETEQKKLELEMQKRRERIERWRAERKKKELDSVKKDVRT
TIMSNLQIPSKKWNLEDDSDEEEEGKNNAEKLIEEEEIDPLDAFMQGVQEEVRKVNKVDG
HRSNLTEKNSLNDLKQSLGVDTTSXGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEEE
QEDLNVAAASLANKQKKELPKIDHAEISYLPFRKNFYVEVPEISRMTAEEVEKYKEELEG
VRVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQTQAIPAIMAGRDLIGIAKTG
SGKTLAFLLPMFRHIMDQPPLEDTDGPIAIVMAPTRELCMQTGKEARKFTKSLGLRVVSV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRVIDNIRPDRQTVMFSATFPRQMEALARRILQKPVEVQIGGRSVVAKEVEQHIVI
VEEEQKFMKLLEVLGVYYEKGSCIVFVDTHENADTLLQKLLKASYPCMALHGAIDQYDRD
STIVDFKSGQIKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFA
YTLVSPDQERFAGDLIRALETSNVPVPESLRTMWLRYQAKQAAEGKQVHTGGGFSGKGFK
FDETEAVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEVKASAIGLPN
LTGLMEVNGTPQASERLELAKRLASRIHIAKNLGPDAKGASQQTAEAILKGGLASSQPVI
TAKTVAEQLAAKLNTRLNYQPKDDDGESECGDSPEAGLEEVFRKYEEELEINDFPQQARW
RVTSKEALAQISEYSEAGITVRGTYYPPPKNPPEGERKLFLAIESTDELAVSKAKIEITR
LIKEELLKMQTSAHHMVNKARYKVL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtagtgggagcgatagaatccatcgtaaacgctcaagaagccgttcacggagt
cctcgtcgtcatcgtcgtagtagtagatctcggtctcgatcgcctcgtcataaactacat
aaatcaataagagacagaaaaaagtctagatctcctcgtcgttcccggtcaccacgtaac
aaaaggaagtcaccagagcgtaagcctgaagaagtgccttttgatccaaccaatccagat
aaggaaactgaacagaaaaaacttgaattagaaatgcaaaagcgtcgagaacgtattgaa
cgttggagagcagaacgcaaaaaaaaagaattagatagtgtaaaaaaagatgttcgaact
acaattatgtcaaacctacaaataccttcaaaaaaatggaatttagaagatgatagcgat
gaggaagaagaaggaaaaaacaatgcagagaaattgattgaagaagaagaaattgatcct
ttagatgcttttatgcagggtgttcaagaagaagtacgtaaagttaataaagtagatggg
catcgaagtaatttaacagaaaaaaattcattgaatgatcttaaacaaagtctaggagtt
gacactactagttsaggagttgtaatcgtatctggagtagcaaagaaaaaagataataac
accagaggtgaactcattgagcaaaatcaagatgccttggaatattcatctgaagaagaa
caagaggatttgaatgtagctgcagctagtttagctaataaacaaaagaaagaattacca
aaaattgatcatgctgaaattagttatttaccatttaggaaaaatttttatgttgaagta
ccagaaatatcccgtatgactgccgaagaagtagaaaaatataaagaggaattagaaggt
gttcgagtaaagggaaaaggatgtcctcgacctataaaagtatgggctcattgtggtgtg
agcaaaaagattatggataatttaaaaaaacataattatgaaaaacctactcctatacaa
acacaagctattcctgctataatggctggacgagatcttattggtattgcaaaaactgga
agtggtaagactctggcgtttttattgccaatgtttaggcatattatggatcagcctcct
ttggaagacactgatggaccaattgctattgttatggcacctacaagagaactttgtatg
cagactggaaaagaagcacgcaagtttactaagagtttagggttaagagttgtatcagtt
tatggtggtactggaatatctgaacaaatagcagaattaaaacgtggtgctgaaattatt
gtatgtactcctggtcgaatgattgatatgttagctgctaataatggtagagttactaat
ttaagacgagtaacatatgtggtattagatgaggctgatcgaatgttcgacatgggattt
gaacctcaagtaatgcgggtaatagataatatacgcccagatcgtcaaactgtaatgttt
agtgctacatttcctcgtcagatggaagctttagctagacgaatactacaaaaacctgtt
gaagttcaaattggaggtagaagtgttgttgccaaagaagtcgaacagcatatagttatt
gtagaagaagaacaaaagttcatgaagttacttgaagttttaggagtttattacgaaaaa
ggaagttgtattgtgtttgtagatactcatgagaatgcagatacacttctacagaaattg
ttaaaagcgtcctacccatgcatggcattacatggtgctatagatcaatatgatagagat
agtactatagttgattttaaaagtggtcaaatcaaattgttagttgctacttctgttgct
gccagaggattagatgttaaagacttgatattagtggttaattatgactgtcccaatcat
tatgaagattatgttcatagatgcgggagaactggaagagcaggtaataaaggatttgca
tacacgttagtttcacctgaccaagaaagatttgctggtgatttaataagagctttggaa
acatctaatgtacctgtaccagaatctttgcgtaccatgtggctacgttaccaagcaaaa
caagctgcagaaggaaagcaagttcatacaggtggtggttttagtggaaaaggatttaaa
tttgatgaaactgaagctgttatggctaatgaaaagaagaaattacaaaaagctgctcta
ggtcttcaagattcagacgatgaagacatagaaggagatattgatcaacaaattgaaaca
atgcttgcacctaagagaattgtaaaagaagtaaaagctagtgctataggacttccaaat
ttaactggcttaatggaagtaaatggaactcctcaagcatcagaacgacttgaattagcc
aaacgtttagcttcacgaatccatattgctaaaaaccttggaccagatgccaaaggtgca
tcacagcaaactgcagaagctatattaaagggtggtcttgctagctctcaacctgttatt
actgctaagactgttgctgaacaattagcagctaaattaaatacccggctgaattatcaa
ccaaaagacgatgatggtgagagtgaatgcggagatagtcctgaagcaggcttagaagaa
gtatttagaaagtatgaagaagaattagaaattaatgatttcccccagcaagctagatgg
agagttacttctaaggaggctttagctcaaatatcagagtattcagaagcagggataaca
gtcagaggtacttattatccaccacctaaaaatcctcctgaaggcgaacgtaaactattt
ttagctattgaaagtactgatgaattagcagtttctaaagcaaaaatagaaatcactcgt
cttatcaaagaagaattattgaaaatgcaaacttctgcacatcacatggttaataaagct
cgatataaagtcttgtaa
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