Diuraphis noxia (Russian wheat aphid): 107169994
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Entry
107169994 CDS
T04900
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107169994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107169994
Enzymes [BR:
dnx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107169994
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107169994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107169994
NCBI-ProteinID:
XP_015375459
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MASTISKACNKIPFELFCRVCEDIYNAKNENKVLILKKFISKCRGSIEKSDNLNIEDTFY
PALRLLIPVADKQRGAYGVKEAALGRLYVKILCLAKDSPDAQKLLNFRLPKFSGSTAGDF
AETLFWVIRSRFEDNGSVTIADINQLLDEIAMKHAINESREVEQILQLMLLKLSANEQKW
LIRLLLKEMRLGIAHTKILNAYHNDANDLYDVCNDLTKVCKMLNNPSVVLHEISVNLFEP
FCPMLSQRCEITDDNKILKTIKYDELFVDIKLDGERFQLHWSKEKNLFKYYSRKGNDYTD
TYGCDDVNGILSPILAKQFKSDVKNCILDGEMMCYNTKYKSFSTKAMNIDVKKLRIGNTH
QPCFCVFDILYYNDQVITNRPLEERLDILNTIFEPLDGIFVHTTRYKARKNELMKYLNDA
IDNHEEGIVVKDPLSIYKPNSRNSGWYKIKPEYTDGALIELDLLIIGGYYGEGKNRGVVS
HFLMGLLEKDGESFKCSAISRVSSGLSIEELADLSRQLSFHWKRVNAGVMPTNIEWGKEK
PDLWIEPESSVILQVKATEIMTSHSFKNNITLRFPRIEKVRYDKPWHDCLTVEDFESIIR
RTEGKLYTSCTGVINSSDKIKKSRVTLTVDKKFQGPNIRDIKYINNMFEDKEFCILNDSE
TMSKIEIEKKILEYGGQVVQNPGNNTFCVLANNIKHTRAHAIKLSGKHSIISTKWILSCF
TDNEFLNWTPENVLFLSKEHQLLMDEKFDQYGDSYTELATVETLRRAMNRVELDDDLVNP
EVDPFLEFQNELFNEEPCFKIFEKFQVYFDBLNLENLPVRNFHTNTVLEMLIFKFNGGKV
CKNIDNNTTHVVIHSSNKNNTNKYQTMKRDRNQAFEIVDENWIKQKIKW
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacaatcagtaaagcttgcaacaaaataccatttgaattattttgtcgagta
tgtgaagacatttataatgctaaaaacgaaaataaagtcctcattctaaaaaaattcatt
agtaaatgtcgagggtcaattgagaaaagtgacaacttaaatatagaagatacattttat
ccggcattaagattactgatacctgtagcagacaaacaaaggggtgcatatggcgttaaa
gaagctgcgttaggaagattgtatgtcaagatattatgccttgcaaaagacagtccagat
gctcagaagcttttgaatttcaggctgccaaaattttctggatctacagctggagatttt
gctgaaactctattttgggttattagaagtcgatttgaagataatggttcagtgactatt
gctgatattaatcaattattggatgaaatagctatgaaacatgctatcaatgaatcaagg
gaagtggaacaaattttacaattaatgctattaaaactcagtgcgaatgagcaaaaatgg
ttgattcgrctattattaaaagaaatgcgcttgggtattgcgcatacaaaaatattaaat
gcatatcataacgatgccaacgatttatatgatgtttgcaatgatttaacaaaggtatgc
aaaatgcttaataayccatcagtggttttgcatgagatatctgttaatttatttgaacct
ttttgcccaatgctaagccagcgttgtgaaattactgatgataataaaatacttaaaaca
attaagtatgatgaattatttgttgacattaaattggatggtgaaagatttcaactccat
tggtccaaagaaaaaaacctttttaaatattattcaagaaaaggcaatgattatacagac
acatatggctgtgatgatgttaatggtattctgagcccaatattagcaaaacagtttaaa
tctgatgtaaagaattgtatcttagatggtgagatgatgtgttataacacaaagtacaaa
tcattttctacaaaagccatgaatattgatgtaaaaaaactaagaataggaaatacacat
caaccctgtttttgtgtatttgatattctctattataatgatcaagtaattacaaaccgt
ccattggaagaacgattagatattttaaatacaatatttgaaccattagatgggattttt
gtacataccactcgatataaagcaagaaaaaatgaattaatgaaatatctcaatgatgca
attgataaccatgaagagggcattgtagttaaagatccactatcaatttacaagccaaat
tcacgaaattcaggatggtataaaattaaaccagaatatacagatggtgcactcattgaa
ttagaccttttaattattggtggatattatggggaaggtaaaaatcgaggtgtggtgagc
catttccttatgggtcttttagaaaaagatggtgaatcatttaagtgttctgctatcagt
cgagttagttctggattatcaatagaagaactagctgatttatcaagacaattgtctttt
cactggaaaagagttaatgctggagtgatgccaacaaacattgagtggggtaaagaaaag
ccagatctttggattgaacctgaatcatcagttattctacaggtaaaggcaacagaaatt
atgacaagccacagttttaaaaataatataacattacgttttccacgaattgaaaaagtt
cgttatgacaaaccgtggcatgactgtctgaccgttgaggattttgagtctataatcagg
cgtacggaaggaaagttatatacttcatgtactggtgtaattaattcttcagataaaatt
aaaaaatcccgtgtgacattaactgttgataaaaaatttcaaggcccaaatataagagat
atcaaatatattaataatatgtttgaagacaaagaattctgtatcctcaacgatagtgaa
acaatgagcaaaattgaaattgaaaaaaagattcttgaatatggtggtcaagtcgtgcaa
aaccctggtaacaatactttttgtgttcttgccaacaacatcaaacatacaagggcgcat
gcaataaaattatcaggcaaacatagtataataagtacaaaatggatactgtcatgtttt
actgacaatgaatttcttaactggactcccgaaaatgttttatttttatccaaggaacac
cagctattaatggatgaaaaatttgatcagtatggtgacagttacacagaattagctact
gttgaaacattacgscgtgcaatgaatcgagttgaactagatgacgatttagtcaaccca
gaagttgatccttttttggaattccaaaatgaactgtttaatgaagaaccatgtttcaaa
atttttgagaaatttcaagtctattttgatratttaaatttagaaaatttgcctgtcaga
aatttccacacgaatacagtgctggaaatgttgatctttaaatttaatggtggcaaagtc
tgtaaaaatattgataacaatactactcatgttgtaattcattcaagtaataaaaataac
actaataaatatcaaactatgaaaagagatcgaaaccaagcatttgaaattgtcgatgag
aactggattaaacaaaaaataaaatggtag
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