Diuraphis noxia (Russian wheat aphid): 107170586
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Entry
107170586 CDS
T04900
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03022
Basal transcription factors
dnx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107170586
09124 Replication and repair
03420 Nucleotide excision repair
107170586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107170586
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107170586
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107170586
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107170586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
TssR_VWA
Motif
Other DBs
NCBI-GeneID:
107170586
NCBI-ProteinID:
XP_015376229
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDETEVKEYRWEGGYEKTWEEVKEDEGGNVEWSVKEIIEKSKRLLAIRQPNVRLGMMRHL
FVIIDSSNSMVEKDLKPTRQLCTYKLLQDFIQDYFDQNPISQLGLITTRNSSAERISELS
GNRKYHLEELKKTFGDFNYCNGLMSVQNSLEIALSVMKMLPSHTSKEILIIGSSLSSCDP
GEINTTIEMLKTNNIRVSMIHLAAEVRMFRHLCNETKGKHNVIVDDVHYKHILWSLVEPV
PLPNSVDASCVKMGFPQELEQKPPFTTCSCHLAEGGKLNAKGFFCPQCNSKYCELPVECK
CCGLILVSSLHLARSLHHLVPIKPFIKIELEEGSSAYCYGCRKRIKVPAENVYFCESCKK
HYCDGCDIFVHNTLHVCPGCAVKRDEKR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccgaagtaaaagaatatcgctgggaaggcggttatgaaaaaacatgggag
gaagtgaaagaagacgaaggaggaaatgttgaatggtcagttaaagagattattgaaaaa
tctaarcgattactggcaattcggcagcctaatgttcgcttaggcatgatgcgacatttg
tttgttattatagatagttctaattcaatggttgaaaaggatttaaaacctactaggcaa
ctgtgtacttataaattgctccaggattttattcaagattattttgatcaaaacccaatc
agtcaacttggtctgataactacaagaaattcatctgcagaacgtatatcagaattatct
ggcaatagaaaatatcatcttgaagaattgaaaaaaacttttggtgattttaattattgc
aacggattgatgtctgtgcaaaactctttagaaattgcattgtcagttatgaaaatgttg
ccttcccatactagtaaagaaatacttattattggatctagtttgagctcttgtgatcca
ggtgaaataaatactactatagaaatgcttaaaacaaataatataagagtttcaatgata
cacctggctgcygaagtgcgaatgtttcgacatttgtgtaatgaaactaaaggcaagcat
aatgtaattgtagatgatgtacattataaacacattctttggtcattggtggaacctgtt
ccacttccaaattcagttgatgcatcatgtgtgaaaatgggttttcctcaagagttagaa
caaaagccaccattcaccacatgctcctgtcatttagcagagggtggcaaattaaacgca
aagggtttcttttgcccacaatgtaacagcaagtattgtgaattacctgtggagtgcaaa
tgctgtggcctcattctcgtgtcttctttacatcttgctagatcattacatcatttggtt
cctattaagccatttataaaaattgagcttgaagaaggttctagtgcctactgctatgga
tgtagaaaaagaataaaggtccctgctgaaaatgtttatttttgtgaatcttgtaaaaaa
cattactgtgacggctgtgacatttttgtgcataatacgttacatgtgtgtccaggttgt
gctgttaaacgagatgaaaaaagataa
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