Diuraphis noxia (Russian wheat aphid): 107173448
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Entry
107173448 CDS
T04900
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx04512
ECM-receptor interaction
dnx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107173448
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107173448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dnx04147
]
107173448
00536 Glycosaminoglycan binding proteins [BR:
dnx00536
]
107173448
Exosome [BR:
dnx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107173448
Glycosaminoglycan binding proteins [BR:
dnx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107173448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
107173448
NCBI-ProteinID:
XP_015379481
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MHLQRDGKMSLRPCTNMCLILFAIFGIQLAFSQQTNPNDLEVVLNIEDSNKTQYHXQNFD
TMAYIFGYEVGPNGQFHHENKGPDGFTYGCYGYVDPEGKLQATHYISDGWGYRVVTPGES
VEIFHHKHDPADENQANESSEGGSEHEHHGHHGVVTAWGDLYFPKGCGGGRPIQGTGQLG
GSGSSGYPSFVGIGQPGAAGTPGSPGSPGSPGSPGSPGSPGYGGSPGSGGSPGSPGSPGS
PGSPGYGGSPGSGGSPGSGGSPGSPGSPGSPGSPGSPGSPGSPGYGGSPGFGGYPGSGGS
PGSPGSFGKPGYPGSPGSPGSPGSPGSPGSPGSPGSPGSPGSLGYPGQGSPGSPGSPGSP
GSPGSPGSLGYPGLGTPGSPGSPGSPGSPGSPGSGSPGSFGYPALGSPGSPGLPGSPGSP
GAPGSPGSLVYPVSGSPGSFGYPGSQGSPGSPGAPGAPGSPGSPGVSGYPGSLGYPGTGS
PGSFGYPGTPGTPGTPGSPGKPGKPGSGSPGGSPGSFGYPGTPGSPGLPGSPGAPGSPGS
LGYPGTGSPGSFGYPGTSGSPGSPGSPGSPGSPGSPGKPGSPGSGFPGSFGYPGTPGSPG
SPGSPGAPGSLGSLGYPGTGSPGSFGYPGTSGSPGSPGSPGSPGKPGSPGSLGYPGSGSP
GLFGYPGTPGSPGSPGSPGTPGSPGSLGYPGSGSTGSFGYPGSQGSPGSPGVPGSPGSPG
FPGSHGKPGYPTTPGSLGYPGSGSPGSFGYPGTPGSPGSPGSPGLPGSPGLPGKPGSGLS
SYPKPGSPGFPGSPGSPGLPGQPGQPGLPGSPSSVYPSPPGPQGPSGSLGATGSPGLPSL
PSYQKPTVYPTSTYPGSSGSPGSPGFPGAPGLPGKPGSPGFPSYQQPSLYPSSSYPSAQG
SAGLPGTPGIPGAPGLPGSPGSSLYNRPSSYPSGPGSPGLPGSPGLPGTPGLPGSYQKPT
QYPGTLYPSGSGAPGSPGTPGYPGLPGQPGTPGLSGSSPYPKPSYPVAPGSPGTPGSPGF
PGLPGKPGSYVPQSSYPGSAYPGTPGQPGLPGTPGLPGKPGASVIPSIPSEKPQPTYQKP
NSGYPGSPGQPGTPGLPGAPGLPGTISYPKPTPPSTYPVGPGQSGYPGSPGLPGQPGTPG
LPGSVYQPSYQKPTSVNQYGNPTLYPGSSYPGSQGLPGTPGLPGQPGTPGTPGSAYPGST
LNQTPNYQSVKPSSQGYPSSSYPGSPGQPGTPGLPGQPGTPGIPSQPSYQKPNPPTYPAK
PTYPPQPSYSGYPGSSGQPGKPGTPGTPGTPGTPGLPAGPPYQKPTPPPAGYPGSPGKPG
QPGIPGLPGIPXQSFGQNPQTSVDYGKPNPSGYPGSTGQPGLSGQPGTPGTPGTPGIPGS
YPTLPKPSSSPINSGSGSVSGSPSNGYPSSIDQTQTGYPNKPVSQPSYPSQNYVYPTSYP
QRPDIPDYGAQQPNEYPGYLSSGYPVPPPPNAPLPNYPPPSSPSGYNGYFELYPGQNQIY
SGQPDSNVYPAGNQYSFNGYPEQQFTYPAKENKGKTPQITTPVSTSTLGYTSKSSQTTVQ
YPKTPSLIDIRVNVPNEPQFNDGQKSVNLGKNELIGPSSGSSGYSSSLTPQYVNSPTKAP
KLPYQFGQESNQVVLSSSKPESSTPLYSVTSKISSTPENINSVESSSTISYEDQFSTLSP
DSSTPVNIIPYPLPIVPNPGSCPCYFVPPTNNNSSNLLQQQQPTFDLNNLPEGAVIGFVP
VVFYPSCGAGSVASKEILSSKLEPVFPSAYQVPYKCSYCEQSESQTATIRSSFNQVLKQS
QLNPSVVIKSPSRKNYPNAPIYDQQEFGKKIKVVNRKTNDE
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgcayctgcaacgggacggcaaaatgtctctgagaccgtgtacaaacatgtgtttaata
ctgttcgcaatttttgggattcagttggctttttctcagcaaactaacccaaatgatttg
gaagtggtgcttaacattgaagatagcaacaaaactcaataccatgakcaaaatttcgat
accatggcctatatattcggctacgaagtaggtccaaatggtcaattccatcacgaaaat
aaaggtccagatggattcacatatggttgctacggatatgtagacccagaaggaaaatta
caagcaactcattatatatctgatggctggggatatagagttgtcacgccaggtgaatct
gtagaaatattccatcataaacatgaccctgcagatgaaaatcaagctaatgaaagttct
gaaggtggttctgaacacgaacatcatggacaccatggagtggtaacagcgtggggtgat
ctttatttcccaaaaggttgtggaggaggacgtccaattcaaggtacaggtcaattgggt
ggatcaggctcatcaggataccctagttttgttggaattggtcaaccaggagcagcaggt
acacctggatctccaggttctccaggatctcccggttctccaggatcaccaggttcccct
ggatatggaggttctccaggatctggtggctctccaggatctcccggttctccaggatca
ccaggttcccctggatatggaggttctccaggatctggtggctctccaggatctggtggc
tctccaggatctccaggatcaccaggatctccaggatcacctggatctccaggatcacca
ggttcccctggatatggtggttctccaggatttggtggctatccaggatctggtggatct
ccaggatcccccggttcattcggtaaaccaggatacccaggatcaccaggatcacccgga
tccccaggatcacctggatccccaggctcaccaggatcacccggatccccaggctctcca
ggatcacttggttatccaggacaaggatctccaggttccccaggatcaccaggctctcca
ggatcaccaggctctccaggatcacttggctacccagggttaggaacaccaggctctcca
ggctctccaggatcaccaggctccccaggctcaccagggtcaggatcaccaggatcattt
ggctatccagcattaggctcaccaggttcaccaggcttaccaggctcaccaggatcacca
ggtgcaccaggatccccaggatcacttgtttacccagtatcaggatctcctggatcattt
ggttaccctggctcacaaggatctccgggttcaccaggagctccgggagctccgggatca
ccaggttcaccaggggtatcaggatatccaggatcacttggttacccaggaacaggatct
ccaggatcatttggctatccaggcactccaggcacaccaggcacaccaggctcaccaggc
aaaccaggcaaaccaggatcaggatctccaggaggatctccaggatcatttggctatcca
ggcacaccaggctcgccgggtttaccaggatcaccaggtgcaccaggatccccaggatca
cttggttacccaggaacaggatctccaggatcttttggctatccaggcacatcaggctca
ccgggttcacccggctcaccgggctcaccgggctcaccgggctcaccaggcaaaccagga
tctccagggtcaggatttccgggatcatttggctatccaggtacaccaggctcaccgggt
tcaccaggatcaccaggtgcaccaggatccctaggatcacttggttacccaggaaccgga
tctccaggatctttcggctatccaggcacatcaggctcacctggctcaccgggttcacca
ggctcaccaggcaaaccaggatctccagggtcacttggttacccaggatcaggatctccg
ggattatttggctatccaggcacaccaggctcaccgggctcaccaggctcaccaggcaca
ccaggatccccaggatcacttggttacccaggatcaggatctactggatcatttggttat
ccyggttcacaaggatctccgggttcaccaggagttccgggatctcctggctcaccagga
ttcccaggttcacatggtaaaccaggatatccaaccacaccaggatcactcggataccca
ggttcaggatctccaggatcatttggctatccaggcacaccgggctctccaggctcacca
ggatctccaggcttaccaggatcaccaggattacctggcaaaccaggttcaggattatca
tcatacccaaaaccaggatccccaggattcccaggatccccagggtctccaggactccca
ggtcaaccaggtcaaccaggattaccgggaagtccatcttcagtttatcctagtcctcca
ggaccacaagggccatcaggttctttaggtgctacaggtagcccaggactacctagctta
ccatcttatcaaaaaccaacagtttatccgacatccacttatcccgggagctcaggttct
ccaggctccccaggtttcccaggagctccaggcttaccaggtaaaccaggatctccaggc
tttccttcatatcaacaaccatccctttaccctagttcatcttatcctagtgcacaaggc
tcggcaggtttaccaggaacaccaggaattccaggkgctcctggattgccaggttcacca
ggatcatctttatataacagaccctcgtcatacccaagtggtccagggtcaccagggtta
ccaggttcaccgggattaccaggaacaccaggtctgcctggttcataccaaaaaccaaca
cagtacccaggaacattataccctagcggatcaggagctccgggatcaccaggcacacca
ggctacccaggattaccaggccaacctggaaccccaggattatcaggttcttcaccctat
ccgaaaccttcataccctgtagctccaggttcaccaggtacaccaggatctccaggtttt
cccggtctaccaggaaaaccaggatcttatgttccgcaatcttcatacccaggatccgct
tatccaggcaccccaggtcaaccaggcctgccaggaactccagggttaccaggtaagcca
ggagcatcagttataccaagtataccgtctgaaaaaccacaaccaacctatcaaaaacca
aattcagggtaccccggaagcccaggtcaaccaggtactccaggtttaccaggagctcca
ggattaccaggtacaatttcatacccgaaacccacaccaccatctacatatcccgttgga
ccaggtcaatcaggataccctggatctccaggacttccaggccaacccggaacaccaggt
ctacctgggtctgtataccaaccctcatatcaaaaaccaacttccgttaaccaatatgga
aatcctactttatatccaggatcttcatatcctggaagtcaaggattacccggaacacca
ggattaccaggtcaaccaggtacacctggaacaccagggtccgcttatccaggttctacg
ttaaatcaaacacctaattatcaatctgtgaaaccaagctctcagggatatccaagttct
tcatatccaggaagtccaggtcaaccaggtaccccaggattaccaggtcaaccaggaact
ccaggtataccaagccagccgtcttatcaaaaaccaaatccaccaacatacccagctaaa
ccaacatatcctcctcaaccatcttattctggttaccccggaagctcaggtcaaccagga
aaaccaggaactcctggtacaccaggtacaccaggcacaccaggccttcctgcgggaccg
ccttaccaaaaacctactcccccacctgctggatatccaggttctcctggtaagccagga
caaccaggaatccctggtctcccaggcattccagmtcaatcatttggtcaaaatcctcaa
acttcggttgactacggaaaacctaatccatcgggatatcccggttctactggtcaacca
ggcctttccggtcaaccaggcactccaggaactccaggaaccccaggaatcccaggttct
tatcccactttaccaaaacccagctcatctccaataaattcaggcagtggaagtgtatca
ggttcaccatctaatggttatccatcatcaatcgatcaaactcaaacaggttatccaaat
aaacctgtttctcaaccatcatacccgagtcagaactatgtttaccctaccagctatcct
caaagaccagatattcctgactacggagcacagcaaccaaatgaatatcctggatattta
agttccggttatccagtacctccacctcccaacgcaccacttcctaattacccaccacct
agttcaccatctggttacaatggttattttgagttgtacccgggtcaaaatcaaatatac
tcaggtcaacctgattctaatgtatacccagctggtaatcaatattctttcaatggttat
cctgaacaacaatttacttaccctgcaaaagaaaacaaaggtaaaacgcctcaaataact
acacccgtttcaacttcaacattgggttatacaagcaagtctagtcaaactactgtgcaa
tatccaaaaacgcctagtttgatagatatacgtgttaatgtgccaaatgaacctcaattc
aacgatggtcaaaagtccgtaaatttaggtaaaaacgaattaataggaccatcgtcagga
tcatctggatattctagctcacttactccacaatacgtgaatagtcctacaaaggcaccc
aaattaccatatcaatttggtcaagaatcaaaccaggtagtcttatcatcaagcaaacca
gaatccagtactccgttgtatagtgtaacctctaaaatatcatcgacacctgaaaatatt
aattcagtggaatcaagcagtaccatatcatatgaagatcaatttagtactctttcacca
gattcttcgacacctgtcaatataattccttatcctttgccaattgtgcctaacccagga
tcttgcccatgctattttgtccccccaacaaataataattcttccaatctattgcaacaa
cagcaaccaacgtttgacttaaacaatctccctgagggtgctgttattggatttgtgcca
gtagtattttatccatcatgtggagcaggaagtgtagcatcaaaagaaatactgtcatct
aagttagagcctgtttttccgtcggcttatcaagtaccatataaatgttcgtattgcgaa
caaagtgaatcacaaactgcgaccatcagaagcagttttaatcaagtactaaaacaaagt
caattaaatccatccgttgtaataaaaagtccaagtagaaagaattacccaaacgcccca
atttatgaccaacaagaatttggaaaaaagataaaagttgtaaacagaaaaactaatgat
gaataa
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