Desulfomicrobium orale: AXF15_04495
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Entry
AXF15_04495 CDS
T04289
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXF15_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_04495
Enzymes [BR:
doa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AXF15_04495
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AXF15_04495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMD92443
UniProt:
A0A0X8JQ33
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All DBs
Position
997541..998314
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AA seq
257 aa
AA seq
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MSIRLFSWNVNGFRAVLGKGFGDWLAGAAPDVLGLQEVKAEEGQIGEARHFPGYACVWNA
ARTKKGYSGTACYTRHEPLAVHRGLPDERYRGEGRVIRLEFEHFHFFNIYFPNGQMSQNR
LDFKMGFYDAFLAHAEDLRRSKPIVVCGDFNTAHREIDLKNPKANENTSGFLPVERAWMD
RFIGHGYVDTFRHCRGDVTGAYSWWSYRHGARSRNAGWRIDYFFVSEELRPLITDAWIDA
DVQGSDHCPVGLELDLP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatccggcttttttcctggaatgtgaatgggttccgggcagtgctgggcaagggt
ttcggcgactggctcgccggagcggctccggatgtgctcggtttgcaggaggtgaaggcg
gaggaagggcagatcggcgaggcccggcattttccggggtatgcctgcgtctggaacgcc
gccagaaccaaaaagggctattccggcacggcctgctacacccgtcatgaacccctggcc
gtacatcgcggcctgcccgacgagcgctaccggggggaaggacgggtcatccgtctggag
ttcgagcacttccattttttcaacatctattttcccaacggccagatgagccagaaccgg
ctggacttcaagatgggcttttacgacgccttcctggcccacgccgaggatctgcgccgg
agcaagcccatcgtggtctgcggggatttcaacaccgcccaccgcgagatcgacctcaaa
aatcccaaggccaacgaaaacacttccggcttcctgccggtggaacgggcctggatggac
cgcttcatcggacacggctacgtggataccttccgccattgccgaggcgacgtgaccgga
gcctattcctggtggagctacaggcacggcgctcgctcgcgcaatgccggatggcgcatc
gactattttttcgtgtccgaggaactgcgccctctgatcacggacgcctggatcgacgcc
gatgtccagggttccgaccactgcccggtgggtcttgaactggacctgccgtga
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