Desulfobulbus oligotrophicus: HP555_04685
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Entry
HP555_04685 CDS
T06967
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog00521
Streptomycin biosynthesis
dog00523
Polyketide sugar unit biosynthesis
dog00541
O-Antigen nucleotide sugar biosynthesis
dog01100
Metabolic pathways
dog01110
Biosynthesis of secondary metabolites
dog01250
Biosynthesis of nucleotide sugars
Module
dog_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HP555_04685 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HP555_04685 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HP555_04685 (rfbC)
Enzymes [BR:
dog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HP555_04685 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
QQG65211
UniProt:
A0A7T6AQ08
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All DBs
Position
1038689..1039237
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AA seq
182 aa
AA seq
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MHVFPAAIPDVLVLEPKVFGDHRGFFFESFNARAFAEMTGLQREFVQDNHSRSSKGVLRG
LHYQIEQPQGKLVRVVVGEVFDVAVDLRKASPTFGQWAGERLSAENKKQLWIPEGFAHGF
LVLSETAEFLYKTTDYYAPQHERTLLWSDPTIGVQWPLCGEPNLAMKDKAGRLFTEAEVF
AD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtttttccagctgcaattccggatgtacttgtacttgagcccaaggttttcggt
gatcaccgcggcttttttttcgaaagtttcaatgcccgggcctttgctgagatgaccggg
ctgcaacgggaatttgtgcaggataaccactcccgctcatcgaagggagttctgcggggg
cttcactaccagattgaacaaccgcaggggaaactggttcgtgtcgtggtcggggaagtg
tttgatgttgcggttgatctgcgcaaggcctcccctacgttcggccagtgggcaggggag
cgtctcagtgctgaaaacaagaaacagctctggattccggaaggttttgcccatggtttt
ctggtgctcagcgagacagccgaatttctctacaaaacgactgactactatgctccgcag
catgagcggaccctgctgtggagcgacccgacaataggtgtccagtggcctctctgcgga
gaaccgaacctggcaatgaaggataaggctggcaggttgtttactgaagctgaagtgttt
gctgactga
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