Desulfosporosinus orientis: Desor_4372
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Entry
Desor_4372 CDS
T01675
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K19789
DNA repair protein RadD
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dor03400
]
Desor_4372
DNA repair and recombination proteins [BR:
dor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Desor_4372
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
AAA_34
SWI2_SNF2
P-loop_SecA
Arb1
Kinase-PPPase
Motif
Other DBs
NCBI-ProteinID:
AET69797
UniProt:
G7WJD8
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All DBs
Position
complement(4540278..4542005)
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AA seq
575 aa
AA seq
DB search
MNTQVIRTQMLSFSLESLKRFLGTNLIDTLLEWTPDNTAFVTKARLTDMILTIHGVNILK
KSEFRKCLLRTFSEKTILSFSVLMSAADRNITDPNDLINKIVVSPWRNNSVSKKILEILE
IEEEIFDTTIIQEPSQESITSPERFYELLDYQFVIKQRILNNLTSGIELNRMLIHMPTGT
GKTKTAMHTICHYYNFNLNKNGLVIWVAHTTELLQQAYDTFISVWKHLGSGDVTACKLWG
NHNINASDFDYNGIVFCGIQKLISMVSSSPEIVEQLIQNCRLIVFDEAHKAAALETKKAI
EKFMIKKHDMPDRGLVGLTATPGRFTEMDVSNDLLAAMFGNKLISIDIEVMNLINMSRVE
ALNIKVEADTISYFQNKRILAKIKKEQLIYQHSLSAEELSKIKDTAKNNGYVDFTDKALE
IIGRNKSRNLRILQRLRELYAERIPTIVFACSVEHGQLLASMLSIENIPNALVIGDMIPQ
ERAEAIRAFKDRDNPINILINFEVLTTGFDSTNIKCVFIARPTQSVVLYSQMLGRGLRGP
QMGGNEECLLIDVKDNLEKYDEKLAFGHFNNYWKA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaggttattcgaacacagatgttaagctttagcttggaaagcctaaaaagg
tttttaggtaccaatttaatagatacattattagaatggacacctgataatacggccttt
gttactaaagcaagattaacggatatgattttgaccattcatggagtcaacatcttaaaa
aaatcagagtttaggaaatgcctattaaggactttttcagaaaaaacgattctatccttt
tcggtactcatgtcagctgcagatcgaaatataaccgatccaaacgatttgataaataaa
attgttgtttccccatggagaaataatagcgtaagcaaaaaaatattggaaattttagaa
attgaagaagagatttttgatactactattattcaagagccttcacaagaatcaattact
tctccagaaaggttttatgagcttttggattatcagttcgttattaaacaaaggattttg
aacaatttaacctccggtattgagcttaatcgtatgcttatacacatgccaacaggtaca
ggtaagactaagaccgcaatgcatacgatatgtcattattataattttaacttaaataaa
aacggattagttatttgggtagctcatacaacagagctattgcaacaggcttatgatact
tttatttctgtttggaaacatttgggtagtggcgatgtaacagcttgtaaattgtggggt
aaccataatattaacgcaagtgactttgattacaatggtatcgttttttgcggaatacag
aagttaatatcaatggtatcaagctcacctgagatcgtagaacaactaattcaaaattgc
agacttatagtttttgatgaagcgcataaagctgcagctttagaaacgaaaaaagcaatc
gaaaagtttatgataaaaaaacatgatatgccggatagaggtttagttggtttgactgct
actcctggaagatttactgaaatggatgttagtaatgatttattagcggctatgtttggg
aacaagctgatttcaattgacatagaagttatgaatttaattaatatgtcacgagttgaa
gctctcaacataaaagttgaagccgacactatttcttacttccaaaacaaacgcatttta
gcaaagatcaaaaaagaacaactgatttaccaacatagcttgtcggctgaagaactaagc
aaaattaaagatactgcgaagaacaatggatatgtggatttcacagacaaagctctcgag
atcattgggagaaataagagcaggaatctaagaatactgcaaaggctaagagaactgtat
gccgaaaggataccgactatagtttttgcctgttcggtcgaacatggtcagctattggca
tctatgctttcaattgagaacatacctaatgctctggttataggagatatgataccacag
gaacgagctgaggctattagagctttcaaggatagagataatcctataaatatacttatt
aactttgaagtcctaactacaggctttgattcaacaaacattaaatgtgtgtttattgcc
agaccgacccaatctgttgttttgtatagtcaaatgcttggacgaggattaagaggtcct
caaatgggtggaaatgaagagtgtctactcattgatgttaaagataatctggaaaaatac
gatgaaaaattagcttttggtcatttcaataattactggaaggcatag
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