Dipodomys ordii (Ord's kangaroo rat): 105981662
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Entry
105981662 CDS
T07834
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105981662 (Chd6)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105981662 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
105981662
NCBI-ProteinID:
XP_012866351
UniProt:
A0A1S3EPQ8
LinkDB
All DBs
Position
Unknown
AA seq
2715 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVFNHSPMSDASVNFDDKSPSPFDCSTDQEEKIEDLASHCLSQKD
LYTAEEDTLFSRKMTSHNGMEDNGGRGTGVKKKRKKKEPGEQEGTAKGSKDREPKPKRKR
EPKEPKEPRKTKEPKKAKEPKELKQKDGTKKSRKPREASGTKEAKEKRSCSDSSTGTKSK
KASREQGPTPVERKKKGKRKSETTLESLELDQGLRNSSLRSTEESTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDV
PLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLDKVGMPDEKSLSA
EQGVTDGTSDIPERGSPDKEDNAEDKLDSLQKQTESPGDGGGDGIFGEKKDDSRAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDL
ISKEAQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKEDGTPDATIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQNNSKLYESLTYTQMSRTSESLESEPENAVKIESRDDHLGLPGGSLPR
VTCESFLPNAQDVISINHDESLLPESLEKMMFGKKGLNRDPGSFQESPSTNTESRKDAIT
ISASRDGSCQRGGHKAEIDSASSLMESLEAGVAQMNIKNGKHLLISLSKDGEPCYSEAGQ
RPESVGQLEDKCLASPAVDAESESGFVELCSLSVCDSKRNLSSDQQLIDLLESKRLESKL
ILSQNQSDEEEDEEENEEETLAVVTRTRERPDVLHLTEPTPVIPRGKNRAFHLDEGKKGS
LEVVSQTPGPQRTFPPIACQCHCKHMERWARGLGSEEFEVEKPKAYNPDLFRSRANSTTV
EREPTAVPSEPFKVKLLKDPWKESTEGKKGFPTYASEGSEPKSEDMDFENKDDYDRDGTC
PNQDYPGKYSEEESKSSASGIADLGDDTQEARVPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPPSQQYEPSGTPPTPILASHAGSGNSFSEPETAEHSFSNGAVLAAQL
QQESFVAPVFTKDEQKHRRPYEFEVERDSKARSLEQFSVTHGHPPIVLNGWHGESAIDLS
CSSEGSPGATSPFPVSASTPKIGAISSLQGTLGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAATRRRRGRRKPVEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPGPATSAPE
PPGTASSQAEKAIPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDVSS
LSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGSRRRGRRPRTDLLKAPTIVADS
PSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPM
MLPGVAAVPQMFGVGGLLNTPMATTCTSTASASLSSTAKSGTAGTEKTAEDRPSGHDVKT
DSLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQ
QARHSEIIGLESQKRKKKKTKGDSPNPNPEPAPGCEREPGSDQNCTEASVPLPPEREHVA
QAGEGALKDSGTTTN
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaatacagaagaaggagaagcagttgtcaaatttaaaagttttcaatcac
tccccaatgtctgatgcctctgtcaattttgacgacaaatccccatcaccgtttgactgc
agcactgaccaggaagagaaaattgaagatcttgccagtcactgtctgtcccagaaagac
ctgtacactgctgaagaggatacccttttttctaggaaaatgacatcccataatgggatg
gaagacaatgggggtagaggtactggggtaaagaagaaacggaagaaaaaggagccagga
gaacaagagggtacagcaaagggcagcaaggacagggagcccaagccaaagaggaaacga
gagcccaaagagccaaaggaacccaggaagaccaaggaaccgaagaaggccaaggagccc
aaggagctgaagcagaaagatggaactaagaagtcccggaagcctcgggaggcctcaggt
accaaggaggccaaagagaagaggagctgctcggactcttcaaccgggacgaagtctaag
aaggccagcagggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaa
agtgagaccacactggagagtttagagctggaccagggcctgcggaactcatccctgcgg
agtactgaggagtccactgagtctgcagacagccagaagcgacgctcaggacggcaagtg
aagcgcagaaaatacaacgaggacctagacttcaaagtggtggatgatgatggggaaaca
atcgcggttcttggagctggccgaacatctgcactctcggcttctacactggcatggcag
gctgaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatccaagacc
gtccaggaggttcaccctggagagcctcctttcgacctagagctattctacgttaagtat
agaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaaggatcct
cgcatcgcacagaagatcaagcgctttaggaataagcaagcccagatgaagcacattttt
acagagcctgatgaagacttgttcaatccagattatgtggaagtggatcgtatcctggag
gtggcacataccaaggatgcagaaacaggggaggaagtgacacattacctggtgaagtgg
tgttccctgccatatgaagagagcacatgggagttagaggaagatgtggatcctgcaaaa
gttaaagaatttgaatctcttcaagttcttcctgaaattaagcatgtggagcggcctgct
tcagactcctggcagaagctcgagaagtctcgggaatataagaacagtaaccagctccgg
gaataccaactggagggaatgaactggcttctttttaattggtataacagaaaaaactgt
attttggctgatgagatgggcctagggaaaaccatccagtccatcacgttcctttcagaa
atattcctcaggggaatccatggccctttcctcatcattgcccctctctcaaccatcact
aactgggagcgagaattccggacatggactgagatgaatgccattgtgtaccacggcagt
cagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcacagggaaat
cccctttcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatcctggca
gattgcccagaactgaagaagattcactggagctgtgtgataattgatgaggctcacagg
ttgaagaataggaactgcaaacttctagagggcctgaagctcatggcgctggaacataaa
gtgctgctcactggaacacccttgcagaactcggtggaagaactctttagtttgctgaat
tttctggagccatcacagtttccttcagagactgctttcttggaggagtttggagatctg
aaaacagaagaacaggtaaagaaactgcagtctatcctaaaaccaatgatgcttcggcgc
ctgaaagatgatgtggaaaagaacctggctcccaaacaagagacaatcattgaagtagaa
ctgaccaatattcagaaaaagtactaccgtgccatcctggagaaaaacttttccttcctg
acaaagggagcaaatcagcataacatgcccaacctcatcaataccatgatggagctgaga
aagtgctgcaaccatccttacctgatcaatggggcagaggaaaaaattctagaagatttc
cgaaaaacccacagccctgatgcctctgactttcagctgcaggccatgatccaggcagca
gggaagctggtgctgatagataaactgctccctaagctgatcgcaggtggccacaaagtg
ctcatcttctcccaaatggtgcgctgccttgacatcttggaagattatctcatccagagg
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgtaccagagcggga
ggcctggggattaatctcacggctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggcccaggctcgatgtcaccgcatcggccagagcaaggccgtg
aaggtgtatcgcctcatcacccggaactcctacgagcgggaaatgtttgacaaggccagc
ctgaagctgggcctggacaaggccgttcttcaggacatcaaccgaaagggcagcaccaat
ggagtacagcagctctcaaaaatggaggtggaagacttactccggaaaggtgcttatgga
gccttgatggatgaggaggatgaaggttcaaagttctgtgaagaagacatagatcagatc
ctgcagagaagaacacacaccatcaccatccagtctgaggggaaagggtccacttttgcc
aaggccagttttgtggcttcaggaaacagaactgatatttccttagatgatcctaacttt
tggcagaaatgggctaaaatagctgaattagacactgaagcaaagaatgagaaggaaagc
ttagtgatcgaccgacctcgcgtgagaaaacagaccaaacactacaactcatttgaagag
gatgagctcatggaattttcagagctggacagtgactcagatgaaaggcccacgagatct
aggcgcctcaatgacaaagccaggcgctacctccgagccgagtgcttccgggtggagaaa
aacctgctcatctttggctggggcaggtggaaggacatcctgactcatgggcgattcaag
tggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtgtactgtgtc
aagcattataagggggatgagaaaatcaagagtttcatttgggagctgatcaccccttcc
aaagatgggcaggcccagaccctccagaaccactcagggttgtctgctccggttcccaga
gggaggaaagggaagaagacaaagaaccaactactgctcccagaattaaagaatgcagac
tggctagccacctgtaaccctgaggtggtcttacatgatgatggctacaagaaacatctc
aaacagcactgcaacaaagtcctcttgagagtccggatgctgtactacctaaaagctgaa
atactgggagaagcagctgataaagcatttgagggaactcctgccagggagctggatgta
cctctgcctgacatagactatgtggagatcccagtggattggtgggatgctgaggctgat
aagtcccttctcattggtgtgttcaagcatggttatgagaggtataatgccatgcgagca
gacccagcactctgcttcctggataaagttgggatgccagatgagaagtctctttctgca
gagcaaggcgtcacagatggaacctcagatattcctgaaagaggcagccctgataaagaa
gacaatgctgaggacaaattagatagcctccagaagcaaacggagagtcctggtgatgga
ggtggtgatggcatttttggtgaaaaaaaggatgacagccgggcagcccaggatggctct
gacccagacaaatcaccgtggccggtctcatctgctcttacggctcgtctccggcgcctg
gtcactatttaccagcgttgcaaccgcaaggaactctgcagacctgaaatcctgggacca
ggtaaccaaggatactgggttcaagaggagatgtttaggagaacatcagaaatggatctc
atcagcaaagaagcccagaagaggtggaccaggagagaacaagcagacttctatagaaca
gtgtcttcctttggagtcatttatgatcaagaaaagaaaatcttcgactggacacagttc
cgcatcatttcccgtttagacaagaagtcagatgagagcctagaacattatttttatagt
tttgtggccatgtgccggaatgtgtgtcgtctgcccgcatggaaagaggatggcactcct
gatgctaccatctatgttgaacccatcactgaggagcgggctgcaaaaactctgtaccgc
attgagctgttacggaaggtccgagagcaggtgctcaggtgtcctcagctgcacgagcgt
ctgcagctctgcaggcccagtctctacctcccagtctggtgggagtgtggaaagcatgac
cgagacctgctcattggcactgccaaacacgggctcaaccgcaccgactattacatcatg
aatgacccccagctgtccttcctggatgcttacagaaactatgcccagcataaaaggact
gacacccaggcaccagggagtctctgttgcctttaccagaacaactccaaattatatgaa
tctcttacctatactcaaatgagtaggacttcagaatcccttgaaagtgaacctgagaat
gcggtgaaaatagaaagcagagatgatcatcttggtcttcccggaggcagcttaccccgg
gtgacctgtgaaagcttccttcctaatgctcaagacgtcatttctatcaaccatgatgaa
agtctgctgcccgagtccttggaaaaaatgatgtttggtaagaaaggactcaacagagat
ccaggctctttccaggagagcccaagtaccaacacagaatctaggaaagatgccattacc
atctctgccagcagagatgggagctgccagcgtggtggccataaggcagaaatagattca
gcctcctcgctcatggaaagcttggaagcaggagtggctcaaatgaacattaaaaatgga
aagcatctgttgatatctctttcaaaagatggggagccatgctacagtgaggcaggccag
agacctgaaagcgtggggcagctcgaggacaaatgcttagcttcccctgccgtggatgca
gaaagcgaaagcgggtttgtagagctgtgcagtcttagtgtctgtgactccaaaagaaac
ctgtcgtccgaccagcaattaattgatttactagaaagcaaacgtttagaaagtaagctg
attctgagtcagaaccagagtgatgaggaagaggacgaggaagaaaatgaggaggaaacc
ttagcagtggtaactcgcaccagagaaaggccagatgtgttgcacctcaccgagcccacc
cctgtcatcccaaggggaaagaaccgagccttccatctagatgaaggcaagaaaggaagc
ctagaggtagtgagccagactcctggaccacagaggaccttccctcctatagcctgtcag
tgccactgcaaacacatggagaggtgggcacggggccttgggagtgaggaattcgaagtg
gagaaacccaaagcttataacccagacttgttcaggagcagagccaacagtaccacagtg
gaacgcgagcccactgctgttccatcagagccatttaaagtgaagctcttaaaagacccg
tggaaagaaagtacagagggaaagaaaggtttccccacatatgcttccgaaggaagtgaa
cccaagtcagaagacatggattttgaaaataaagatgattatgatagagatgggacctgc
cctaatcaagactatccagggaagtactcggaagaggaaagcaagagttcagcctccggc
attgcagaccttggggatgacacacaggaagctcgggtccccaccatcgcccagctgctc
caggagaaaacactctattccttctcagagtggccaaaagaccgggtgataattaaccgc
ctagataatatctgccacgtggtgttgaaggggaagtggccccccagtcagcagtatgag
ccttcaggcacacctcccacccccatcttagccagccatgctggttctggaaacagcttc
tcagagccagaaacggcagagcacagcttcagcaacggggcagtattggcggctcaactc
cagcaggagagctttgtagctccggtattcacaaaagatgaacagaagcacagacgaccc
tatgagtttgaggtggaaagggattccaaggctcggagcctagaacagttctctgtcacc
cacgggcaccctcccatcgtcctcaatggctggcatggggaatcagccatagacctctcc
tgctcatcagaggggtccccgggagccacatcccctttcccagtgagtgccagcaccccc
aagattggagctatcagttcacttcaaggaaccctcggcatggacttgtctgggattcta
caagctggcctgatccatccagtgaccggacagattgtcaatgggagcctaaggagagat
gatgcagccacaaggaggcggagagggaggcggaaacctgttgaaggagggatggacctc
atctttctgaaggagcaaacacttcaggcaggaatcttggaagtccatgaagacccagga
caggccaccctgagcaccacacaccctgaagggccgggacccgctacctcagcccctgag
cctccaggaacagccagcagccaggctgagaaagccattcccagcaagagcttgcttgac
tggctgcggcagcaggctgactactctttggacgttcctggatttggagcaagtttttca
gataaaccaaagcagaggagaccacgctgtaaagaacctggaaaattagatgtcagctct
ctgagcggagaagagagggttcctgctgtccccaaggagccaggactgaggggattcctc
ccagaaaacaagttcaaccacaccttggccgagcctgttcttcgagatgcaggctcacgc
aggagaggccgacggccgcggactgatctcctgaaagcgcccaccatcgtggcagactct
ccctccggaatggggccgctgttcatgaatgggctaattgcgggaatggatctggtaggg
ttgcagaatgtgagaaacatgccaggcatccccctcaccggactggtgggcttcccagct
ggcttcgccaccatgcccacgggtgaagaggtcaagagcaccctgagcatgctgcccatg
atgctcccgggtgtggccgctgtgccccagatgtttggcgttgggggacttctcaacaca
cccatggccaccacctgcacctccaccgcgtcagcgtctctctcaagcacagccaaaagt
ggcacagcgggtactgagaagacggcggaggacaggccaagcggccacgacgtgaaaaca
gactcactagccgaagacaagcctggtcctagcccgttttctgatcagtccgaacctgca
ataactactagtagtcctgtggcttttaacccatttctcattccaggagtgtctcctgga
ctcatctacccatccatgtttctctcccccggcatgggcatggctctgccagccatgcag
caggccagacactcggaaatcataggtctggagagccagaagaggaagaagaagaagaca
aagggagacagccccaaccccaacccagagcccgctcccgggtgcgagcgggagccaggc
agcgaccagaactgcaccgaggccagtgtccctttgcccccagagagagaacacgtggct
caggctggggaaggggcgctcaaagactccggcaccaccaccaactag
DBGET
integrated database retrieval system
